Protein–RNA interactions for Protein: Q2QI47

Ush2A, Usherin, mousemouse

Predictions only

Length 5,193 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush2AQ2QI47 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Gm18115-201ENSMUST00000221209 621 ntBASIC10.39□□□□□ -0.75
Ush2AQ2QI47 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Sdccag3-203ENSMUST00000114100 2099 ntAPPRIS ALT2 TSL 5 BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Syap1-201ENSMUST00000033723 2087 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC10.39□□□□□ -0.75
Ush2AQ2QI47 Odf3b-204ENSMUST00000227834 930 ntBASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Gm27525-201ENSMUST00000184465 107 ntBASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Gm5186-201ENSMUST00000218781 920 ntBASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC10.38□□□□□ -0.75
Ush2AQ2QI47 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Gm6623-201ENSMUST00000173570 544 ntBASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Gm34391-201ENSMUST00000203706 907 ntBASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Gm42418-201ENSMUST00000182010 1831 ntBASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Gm42911-201ENSMUST00000199360 1630 ntBASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Ush2AQ2QI47 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Rcor3-206ENSMUST00000192491 1623 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Gm7712-202ENSMUST00000222331 1510 ntBASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Get4-201ENSMUST00000026976 2107 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Ptbp3-208ENSMUST00000172768 2147 ntAPPRIS ALT2 TSL 5 BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Gm18958-201ENSMUST00000174258 762 ntBASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Ush2AQ2QI47 Ppm1j-201ENSMUST00000002298 1721 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Ears2-201ENSMUST00000033159 2046 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 AC156016.1-201ENSMUST00000227190 1035 ntBASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Spr-ps1-201ENSMUST00000089584 605 ntBASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Tcf7-202ENSMUST00000109071 1742 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC10.35□□□□□ -0.75
Ush2AQ2QI47 Pgam1-201ENSMUST00000011896 1831 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Cops7a-201ENSMUST00000032220 1817 ntAPPRIS P1 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC10.34□□□□□ -0.75
Ush2AQ2QI47 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC10.34□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 27.9 ms