Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Mpzl1-201ENSMUST00000068705 2171 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Stard3nl-208ENSMUST00000200323 1128 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Sh3bp1-203ENSMUST00000089378 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Nkx2-2-201ENSMUST00000067075 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Col19a1Q0VF58 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Col19a1Q0VF58 Gm6659-201ENSMUST00000174752 547 ntBASIC20.53■□□□□ 0.88
Col19a1Q0VF58 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC20.53■□□□□ 0.88
Col19a1Q0VF58 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Col19a1Q0VF58 Cotl1-201ENSMUST00000034285 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Col19a1Q0VF58 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Col19a1Q0VF58 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 Tekt5-202ENSMUST00000115831 1277 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 Sct-202ENSMUST00000167790 507 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 AC175538.1-201ENSMUST00000225343 1269 ntBASIC20.52■□□□□ 0.88
Col19a1Q0VF58 Sct-201ENSMUST00000046156 534 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Col19a1Q0VF58 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Col19a1Q0VF58 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
Col19a1Q0VF58 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col19a1Q0VF58 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col19a1Q0VF58 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col19a1Q0VF58 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Col19a1Q0VF58 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col19a1Q0VF58 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col19a1Q0VF58 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC20.51■□□□□ 0.87
Col19a1Q0VF58 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.51■□□□□ 0.87
Col19a1Q0VF58 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Col19a1Q0VF58 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Gm30025-201ENSMUST00000218555 728 ntBASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
Col19a1Q0VF58 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.49■□□□□ 0.87
Col19a1Q0VF58 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col19a1Q0VF58 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col19a1Q0VF58 Alkbh1-212ENSMUST00000185301 408 ntBASIC20.49■□□□□ 0.87
Col19a1Q0VF58 Gm10517-202ENSMUST00000192970 758 ntBASIC20.49■□□□□ 0.87
Col19a1Q0VF58 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.49■□□□□ 0.87
Col19a1Q0VF58 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.49■□□□□ 0.87
Col19a1Q0VF58 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
Col19a1Q0VF58 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
Col19a1Q0VF58 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Col19a1Q0VF58 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
Col19a1Q0VF58 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC20.48■□□□□ 0.87
Col19a1Q0VF58 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Col19a1Q0VF58 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col19a1Q0VF58 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col19a1Q0VF58 Atg3-201ENSMUST00000023343 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Col19a1Q0VF58 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col19a1Q0VF58 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col19a1Q0VF58 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col19a1Q0VF58 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Col19a1Q0VF58 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC20.47■□□□□ 0.87
Col19a1Q0VF58 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Col19a1Q0VF58 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC20.47■□□□□ 0.87
Col19a1Q0VF58 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Col19a1Q0VF58 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
Col19a1Q0VF58 Gm43672-201ENSMUST00000199072 1731 ntBASIC20.47■□□□□ 0.87
Col19a1Q0VF58 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Wrnip1-201ENSMUST00000021832 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Col19a1Q0VF58 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 Stk32c-201ENSMUST00000016125 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Col19a1Q0VF58 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms