Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC17.29■□□□□ 0.36
Chd8Q09XV5 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chd8Q09XV5 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chd8Q09XV5 Gm8587-201ENSMUST00000076538 843 ntBASIC17.29■□□□□ 0.36
Chd8Q09XV5 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chd8Q09XV5 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Arf4-201ENSMUST00000022429 2165 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Fbxw2-204ENSMUST00000113077 1670 ntTSL 5 BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Timm23-208ENSMUST00000226683 750 ntBASIC17.28■□□□□ 0.36
Chd8Q09XV5 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
Chd8Q09XV5 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd8Q09XV5 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd8Q09XV5 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd8Q09XV5 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Chd8Q09XV5 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Chd8Q09XV5 March2-210ENSMUST00000186022 2470 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
Chd8Q09XV5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Chd8Q09XV5 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd8Q09XV5 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Chd8Q09XV5 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Abhd12-201ENSMUST00000056149 1999 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.26■□□□□ 0.35
Chd8Q09XV5 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Txnrd2-212ENSMUST00000177856 1878 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Chd8Q09XV5 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd8Q09XV5 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd8Q09XV5 Rfx5-204ENSMUST00000107255 2350 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Chd8Q09XV5 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC17.25■□□□□ 0.35
Chd8Q09XV5 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd8Q09XV5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd8Q09XV5 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Chd8Q09XV5 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
Chd8Q09XV5 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Chd8Q09XV5 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Chd8Q09XV5 Gm18115-201ENSMUST00000221209 621 ntBASIC17.24■□□□□ 0.35
Chd8Q09XV5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd8Q09XV5 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd8Q09XV5 Hint2-201ENSMUST00000030192 610 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd8Q09XV5 Tollip-202ENSMUST00000055819 1100 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd8Q09XV5 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Chd8Q09XV5 March11-201ENSMUST00000126304 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Chd8Q09XV5 Kcnq5-205ENSMUST00000173058 2472 ntTSL 5 BASIC17.23■□□□□ 0.35
Chd8Q09XV5 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd8Q09XV5 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Chd8Q09XV5 Gm22697-201ENSMUST00000175194 63 ntBASIC17.23■□□□□ 0.35
Chd8Q09XV5 Gm27525-201ENSMUST00000184465 107 ntBASIC17.23■□□□□ 0.35
Chd8Q09XV5 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Carm1-201ENSMUST00000034703 3220 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Gm42699-201ENSMUST00000198104 1657 ntBASIC17.22■□□□□ 0.35
Chd8Q09XV5 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Chd8Q09XV5 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd8Q09XV5 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Mir6236-201ENSMUST00000184437 123 ntBASIC17.21■□□□□ 0.35
Chd8Q09XV5 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Fance-202ENSMUST00000114801 1751 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Kazald1-202ENSMUST00000111948 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Chd8Q09XV5 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd8Q09XV5 Gm26796-201ENSMUST00000181092 2276 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Chd8Q09XV5 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Chd8Q09XV5 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms