Protein–RNA interactions for Protein: P84244

H3f3a, Histone H3.3, mousemouse

Known RBP Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3f3aP84244 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
H3f3aP84244 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H3f3aP84244 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
H3f3aP84244 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.96■□□□□ 0.31
H3f3aP84244 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC16.96■□□□□ 0.31
H3f3aP84244 Gab2-201ENSMUST00000004622 6168 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 Lfng-201ENSMUST00000031555 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC16.96■□□□□ 0.31
H3f3aP84244 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC16.96■□□□□ 0.31
H3f3aP84244 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
H3f3aP84244 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
H3f3aP84244 Shq1-201ENSMUST00000089245 1638 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
H3f3aP84244 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
H3f3aP84244 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3f3aP84244 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H3f3aP84244 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
H3f3aP84244 Lmtk3-204ENSMUST00000209617 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3f3aP84244 AC099934.2-201ENSMUST00000196389 70 ntBASIC16.95■□□□□ 0.3
H3f3aP84244 AC156953.1-201ENSMUST00000196953 70 ntBASIC16.95■□□□□ 0.3
H3f3aP84244 AC157822.2-201ENSMUST00000200291 70 ntBASIC16.95■□□□□ 0.3
H3f3aP84244 AC124603.1-201ENSMUST00000223843 308 ntBASIC16.95■□□□□ 0.3
H3f3aP84244 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3f3aP84244 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
H3f3aP84244 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
H3f3aP84244 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3f3aP84244 Hcn2-201ENSMUST00000020581 3089 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
H3f3aP84244 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC16.95■□□□□ 0.3
H3f3aP84244 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
H3f3aP84244 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
H3f3aP84244 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
H3f3aP84244 Wdr41-202ENSMUST00000159647 2289 ntTSL 5 BASIC16.94■□□□□ 0.3
H3f3aP84244 Wdr41-206ENSMUST00000167155 2289 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H3f3aP84244 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3f3aP84244 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3f3aP84244 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC16.94■□□□□ 0.3
H3f3aP84244 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC16.94■□□□□ 0.3
H3f3aP84244 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3f3aP84244 Gm9988-201ENSMUST00000069786 435 ntBASIC16.94■□□□□ 0.3
H3f3aP84244 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3f3aP84244 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
H3f3aP84244 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
H3f3aP84244 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
H3f3aP84244 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3f3aP84244 Gm5874-201ENSMUST00000096101 508 ntBASIC16.93■□□□□ 0.3
H3f3aP84244 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3f3aP84244 Reep4-203ENSMUST00000226563 1444 ntBASIC16.93■□□□□ 0.3
H3f3aP84244 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
H3f3aP84244 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
H3f3aP84244 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
H3f3aP84244 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC16.93■□□□□ 0.3
H3f3aP84244 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC16.93■□□□□ 0.3
H3f3aP84244 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
H3f3aP84244 Gm8495-201ENSMUST00000188740 694 ntBASIC16.92■□□□□ 0.3
H3f3aP84244 Gm38205-201ENSMUST00000192243 258 ntBASIC16.92■□□□□ 0.3
H3f3aP84244 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
H3f3aP84244 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
H3f3aP84244 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
H3f3aP84244 Baiap2l2-201ENSMUST00000165408 2100 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3f3aP84244 Supv3l1-201ENSMUST00000020273 2604 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3f3aP84244 Gm13146-201ENSMUST00000118508 780 ntBASIC16.91■□□□□ 0.3
H3f3aP84244 Gm13234-201ENSMUST00000120010 747 ntBASIC16.91■□□□□ 0.3
H3f3aP84244 Sirpa-209ENSMUST00000160276 876 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
H3f3aP84244 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.91■□□□□ 0.3
H3f3aP84244 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3f3aP84244 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC16.91■□□□□ 0.3
H3f3aP84244 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3f3aP84244 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3f3aP84244 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3f3aP84244 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
H3f3aP84244 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3f3aP84244 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3f3aP84244 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3f3aP84244 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
H3f3aP84244 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3f3aP84244 Pafah1b1-201ENSMUST00000021091 5803 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3f3aP84244 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
H3f3aP84244 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
H3f3aP84244 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3f3aP84244 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
H3f3aP84244 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
H3f3aP84244 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
H3f3aP84244 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
H3f3aP84244 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC16.89■□□□□ 0.3
H3f3aP84244 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
H3f3aP84244 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3f3aP84244 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3f3aP84244 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
H3f3aP84244 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
H3f3aP84244 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3f3aP84244 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.89■□□□□ 0.29
H3f3aP84244 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3f3aP84244 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
H3f3aP84244 Igf2bp2-201ENSMUST00000100052 3899 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms