Protein–RNA interactions for Protein: P83917

Cbx1, Chromobox protein homolog 1, mousemouse

Known RBP Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx1P83917 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cbx1P83917 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cbx1P83917 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Plxnd1-201ENSMUST00000015511 6907 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Lgals3-201ENSMUST00000142734 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
Cbx1P83917 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cbx1P83917 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC20.29■□□□□ 0.84
Cbx1P83917 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC20.29■□□□□ 0.84
Cbx1P83917 1700051O22Rik-202ENSMUST00000195451 638 ntBASIC20.29■□□□□ 0.84
Cbx1P83917 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 AC154231.1-201ENSMUST00000220564 2175 ntBASIC20.29■□□□□ 0.84
Cbx1P83917 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
Cbx1P83917 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cbx1P83917 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC20.29■□□□□ 0.84
Cbx1P83917 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx1P83917 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx1P83917 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx1P83917 Lrrfip2-205ENSMUST00000196981 1839 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cbx1P83917 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC20.28■□□□□ 0.84
Cbx1P83917 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx1P83917 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
Cbx1P83917 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx1P83917 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx1P83917 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx1P83917 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cbx1P83917 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cbx1P83917 Gm43042-201ENSMUST00000198676 1820 ntTSL 5 BASIC20.27■□□□□ 0.84
Cbx1P83917 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cbx1P83917 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cbx1P83917 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cbx1P83917 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cbx1P83917 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Cbx1P83917 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC20.27■□□□□ 0.84
Cbx1P83917 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Cbx1P83917 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Cbx1P83917 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.27■□□□□ 0.83
Cbx1P83917 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Cbx1P83917 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx1P83917 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Cbx1P83917 AC116713.1-201ENSMUST00000215074 430 ntBASIC20.26■□□□□ 0.83
Cbx1P83917 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx1P83917 Ccdc84-201ENSMUST00000053286 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx1P83917 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx1P83917 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx1P83917 H13-204ENSMUST00000125366 5204 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cbx1P83917 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.26■□□□□ 0.83
Cbx1P83917 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Crebbp-201ENSMUST00000023165 10820 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Fam131b-203ENSMUST00000143278 4104 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Nsd1-206ENSMUST00000224918 1001 ntBASIC20.25■□□□□ 0.83
Cbx1P83917 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Cbx1P83917 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cbx1P83917 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Cbx1P83917 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx1P83917 March8-204ENSMUST00000123405 2102 ntTSL 5 BASIC20.24■□□□□ 0.83
Cbx1P83917 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC20.24■□□□□ 0.83
Cbx1P83917 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.24■□□□□ 0.83
Cbx1P83917 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx1P83917 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx1P83917 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx1P83917 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.24■□□□□ 0.83
Cbx1P83917 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx1P83917 Gm20100-201ENSMUST00000209418 2272 ntBASIC20.24■□□□□ 0.83
Cbx1P83917 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cbx1P83917 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cbx1P83917 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Cbx1P83917 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx1P83917 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cbx1P83917 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx1P83917 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx1P83917 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx1P83917 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx1P83917 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx1P83917 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx1P83917 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Cbx1P83917 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx1P83917 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx1P83917 Akt1s1-204ENSMUST00000107885 1812 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cbx1P83917 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cbx1P83917 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Cbx1P83917 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cbx1P83917 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Cbx1P83917 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 13.7 ms