Protein–RNA interactions for Protein: P82347

Sgcd, Delta-sarcoglycan, mousemouse

Predictions only

Length 289 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcdP82347 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SgcdP82347 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SgcdP82347 Dapk1-207ENSMUST00000226059 5009 ntBASIC17.56■□□□□ 0.4
SgcdP82347 Slc25a38-201ENSMUST00000035106 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SgcdP82347 Chkb-201ENSMUST00000023289 1707 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Sept9-201ENSMUST00000019038 3784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Gyg-201ENSMUST00000118015 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Gm45417-201ENSMUST00000209533 758 ntBASIC17.55■□□□□ 0.4
SgcdP82347 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
SgcdP82347 Fdxacb1-203ENSMUST00000176335 1817 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
SgcdP82347 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SgcdP82347 Gm6627-201ENSMUST00000218299 2386 ntBASIC17.54■□□□□ 0.4
SgcdP82347 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Rnaseh2a-202ENSMUST00000109736 2981 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SgcdP82347 Pitx1-201ENSMUST00000021968 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Gm42939-201ENSMUST00000197514 2205 ntBASIC17.54■□□□□ 0.4
SgcdP82347 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.54■□□□□ 0.4
SgcdP82347 1700016H13Rik-205ENSMUST00000134926 1104 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.54■□□□□ 0.4
SgcdP82347 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
SgcdP82347 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SgcdP82347 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Tpst2-201ENSMUST00000031287 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SgcdP82347 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC17.53■□□□□ 0.4
SgcdP82347 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SgcdP82347 Tmem11-203ENSMUST00000168218 1511 ntTSL 2 BASIC17.53■□□□□ 0.4
SgcdP82347 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SgcdP82347 Gm20548-204ENSMUST00000174528 791 ntTSL 3 BASIC17.53■□□□□ 0.4
SgcdP82347 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
SgcdP82347 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SgcdP82347 Atrnl1-201ENSMUST00000077282 6581 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
SgcdP82347 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Stx18-202ENSMUST00000042146 1473 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Ak5-201ENSMUST00000045262 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Gm16253-201ENSMUST00000148290 550 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Ankrd11-207ENSMUST00000212937 943 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.4
SgcdP82347 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Erlin1-202ENSMUST00000112028 3136 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Smim19-201ENSMUST00000033935 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SgcdP82347 Cacnb1-202ENSMUST00000092736 1880 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SgcdP82347 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SgcdP82347 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.39
SgcdP82347 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Cdca4-201ENSMUST00000062092 2425 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Gnas-206ENSMUST00000109084 1695 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Acot3-203ENSMUST00000223080 1545 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SgcdP82347 Htra2-201ENSMUST00000089645 1725 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SgcdP82347 Smim19-202ENSMUST00000163774 1435 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SgcdP82347 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SgcdP82347 Rps2-ps10-202ENSMUST00000170335 965 ntBASIC17.5■□□□□ 0.39
SgcdP82347 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SgcdP82347 Gm2464-202ENSMUST00000194841 877 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SgcdP82347 Ikzf1-202ENSMUST00000048122 911 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SgcdP82347 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SgcdP82347 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SgcdP82347 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC17.5■□□□□ 0.39
SgcdP82347 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SgcdP82347 Anks1b-217ENSMUST00000182550 1868 ntTSL 5 BASIC17.5■□□□□ 0.39
SgcdP82347 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SgcdP82347 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.5■□□□□ 0.39
SgcdP82347 Rncr4-201ENSMUST00000194541 2234 ntBASIC17.49■□□□□ 0.39
SgcdP82347 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SgcdP82347 Tsen34-202ENSMUST00000108627 1319 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms