Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC20.34■□□□□ 0.85
NcanP55066 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NcanP55066 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NcanP55066 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
NcanP55066 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NcanP55066 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
NcanP55066 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
NcanP55066 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
NcanP55066 Pbx2-201ENSMUST00000038149 3068 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NcanP55066 Htra2-203ENSMUST00000113963 1629 ntTSL 5 BASIC20.34■□□□□ 0.85
NcanP55066 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
NcanP55066 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
NcanP55066 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.85
NcanP55066 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC20.33■□□□□ 0.85
NcanP55066 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC20.33■□□□□ 0.85
NcanP55066 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
NcanP55066 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
NcanP55066 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
NcanP55066 Cntfr-203ENSMUST00000102961 1995 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NcanP55066 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC20.32■□□□□ 0.84
NcanP55066 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC20.32■□□□□ 0.84
NcanP55066 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NcanP55066 Gm13158-201ENSMUST00000122007 736 ntBASIC20.32■□□□□ 0.84
NcanP55066 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
NcanP55066 Dus1l-203ENSMUST00000106135 1863 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
NcanP55066 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NcanP55066 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC20.32■□□□□ 0.84
NcanP55066 Mau2-206ENSMUST00000212451 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NcanP55066 Tfg-201ENSMUST00000065515 1945 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NcanP55066 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NcanP55066 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC20.31■□□□□ 0.84
NcanP55066 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
NcanP55066 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NcanP55066 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NcanP55066 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NcanP55066 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC20.31■□□□□ 0.84
NcanP55066 Aebp2-203ENSMUST00000095350 2575 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
NcanP55066 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NcanP55066 Puf60-202ENSMUST00000100527 1878 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
NcanP55066 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC20.3■□□□□ 0.84
NcanP55066 Alg1-201ENSMUST00000049207 1669 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
NcanP55066 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NcanP55066 Slc2a8-204ENSMUST00000153484 1168 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NcanP55066 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
NcanP55066 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC20.3■□□□□ 0.84
NcanP55066 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC20.3■□□□□ 0.84
NcanP55066 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC20.3■□□□□ 0.84
NcanP55066 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NcanP55066 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NcanP55066 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NcanP55066 Gm8668-201ENSMUST00000120559 1447 ntBASIC20.29■□□□□ 0.84
NcanP55066 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
NcanP55066 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.29■□□□□ 0.84
NcanP55066 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NcanP55066 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NcanP55066 Gm15847-201ENSMUST00000121417 1065 ntBASIC20.29■□□□□ 0.84
NcanP55066 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NcanP55066 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NcanP55066 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NcanP55066 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NcanP55066 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
NcanP55066 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NcanP55066 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NcanP55066 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NcanP55066 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NcanP55066 Smim14-202ENSMUST00000121661 1056 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
NcanP55066 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NcanP55066 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NcanP55066 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NcanP55066 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NcanP55066 Gm15043-201ENSMUST00000118843 1543 ntBASIC20.27■□□□□ 0.84
NcanP55066 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC20.27■□□□□ 0.84
NcanP55066 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC20.27■□□□□ 0.84
NcanP55066 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NcanP55066 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NcanP55066 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NcanP55066 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NcanP55066 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
NcanP55066 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NcanP55066 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NcanP55066 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
NcanP55066 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NcanP55066 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NcanP55066 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NcanP55066 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
NcanP55066 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
NcanP55066 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 Mindy2-202ENSMUST00000213380 2521 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC20.26■□□□□ 0.83
NcanP55066 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC20.26■□□□□ 0.83
NcanP55066 Fuz-209ENSMUST00000208179 1164 ntTSL 5 BASIC20.26■□□□□ 0.83
NcanP55066 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
NcanP55066 Ube2e3-201ENSMUST00000028398 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 94.3 ms