Protein–RNA interactions for Protein: P54254

Atxn1, Ataxin-1, mousemouse

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atxn1P54254 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atxn1P54254 Dcbld1-201ENSMUST00000069004 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atxn1P54254 Fbxw8-201ENSMUST00000049474 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atxn1P54254 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC18.9■□□□□ 0.62
Atxn1P54254 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Atxn1P54254 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Atxn1P54254 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atxn1P54254 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atxn1P54254 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC18.9■□□□□ 0.62
Atxn1P54254 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atxn1P54254 Cacnb1-205ENSMUST00000107562 1745 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Atxn1P54254 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Atxn1P54254 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Atxn1P54254 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atxn1P54254 Gm6576-201ENSMUST00000169678 883 ntBASIC18.89■□□□□ 0.61
Atxn1P54254 Mir6236-201ENSMUST00000184437 123 ntBASIC18.89■□□□□ 0.61
Atxn1P54254 Gm44672-201ENSMUST00000206944 1098 ntBASIC18.89■□□□□ 0.61
Atxn1P54254 Tial1-209ENSMUST00000141126 1344 ntTSL 5 BASIC18.89■□□□□ 0.61
Atxn1P54254 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atxn1P54254 Thoc6-201ENSMUST00000047436 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atxn1P54254 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
Atxn1P54254 Fah-201ENSMUST00000032865 1585 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atxn1P54254 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
Atxn1P54254 Exosc4-201ENSMUST00000059045 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atxn1P54254 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atxn1P54254 Gpr137c-207ENSMUST00000227086 4997 ntAPPRIS ALT2 BASIC18.88■□□□□ 0.61
Atxn1P54254 Kdm3b-201ENSMUST00000043775 6363 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atxn1P54254 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC18.88■□□□□ 0.61
Atxn1P54254 Arhgef33-211ENSMUST00000225658 473 ntBASIC18.88■□□□□ 0.61
Atxn1P54254 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atxn1P54254 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atxn1P54254 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Atxn1P54254 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
Atxn1P54254 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atxn1P54254 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atxn1P54254 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Atxn1P54254 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atxn1P54254 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Atxn1P54254 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Atxn1P54254 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Atxn1P54254 Sh3gl1-201ENSMUST00000003268 2072 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atxn1P54254 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Atxn1P54254 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC18.87■□□□□ 0.61
Atxn1P54254 Rfx8-202ENSMUST00000151913 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 Prrt1-201ENSMUST00000015620 1940 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Atxn1P54254 Hhex-201ENSMUST00000025944 1802 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 Spsb3-203ENSMUST00000117890 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 Gm45015-201ENSMUST00000207943 1364 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Atxn1P54254 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC18.86■□□□□ 0.61
Atxn1P54254 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Atxn1P54254 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atxn1P54254 B630019K06Rik-201ENSMUST00000064196 2583 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Atxn1P54254 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC18.85■□□□□ 0.61
Atxn1P54254 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atxn1P54254 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atxn1P54254 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC18.85■□□□□ 0.61
Atxn1P54254 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Atxn1P54254 Golph3-202ENSMUST00000226517 2359 ntBASIC18.85■□□□□ 0.61
Atxn1P54254 Aktip-202ENSMUST00000120213 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atxn1P54254 Socs2-213ENSMUST00000170690 2195 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Atxn1P54254 AC152827.1-201ENSMUST00000221143 2189 ntBASIC18.85■□□□□ 0.61
Atxn1P54254 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Atxn1P54254 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC18.85■□□□□ 0.61
Atxn1P54254 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Atxn1P54254 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atxn1P54254 Mark2-207ENSMUST00000165286 2975 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Atxn1P54254 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atxn1P54254 Pkm-201ENSMUST00000034834 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atxn1P54254 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atxn1P54254 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC18.84■□□□□ 0.61
Atxn1P54254 AL672049.1-201ENSMUST00000197943 91 ntBASIC18.84■□□□□ 0.61
Atxn1P54254 CT010467.1-202ENSMUST00000205406 714 ntBASIC18.84■□□□□ 0.61
Atxn1P54254 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atxn1P54254 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Atxn1P54254 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Atxn1P54254 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Atxn1P54254 Ccdc149-202ENSMUST00000198008 2470 ntTSL 5 BASIC18.83■□□□□ 0.61
Atxn1P54254 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atxn1P54254 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Atxn1P54254 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
Atxn1P54254 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC18.83■□□□□ 0.6
Atxn1P54254 Gas5-203ENSMUST00000159119 665 ntTSL 5 BASIC18.83■□□□□ 0.6
Atxn1P54254 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC18.83■□□□□ 0.6
Atxn1P54254 Mvb12b-201ENSMUST00000041555 4998 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atxn1P54254 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atxn1P54254 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atxn1P54254 Tusc3-203ENSMUST00000209440 1535 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Atxn1P54254 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Atxn1P54254 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC18.82■□□□□ 0.6
Atxn1P54254 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atxn1P54254 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atxn1P54254 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC18.82■□□□□ 0.6
Atxn1P54254 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Atxn1P54254 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms