Protein–RNA interactions for Protein: P53776

Lhx4, LIM/homeobox protein Lhx4, mousemouse

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx4P53776 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
Lhx4P53776 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Lhx4P53776 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx4P53776 Deptor-203ENSMUST00000100660 1377 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx4P53776 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
Lhx4P53776 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx4P53776 Smad6-203ENSMUST00000179458 273 ntBASIC16.06■□□□□ 0.16
Lhx4P53776 Gm43060-201ENSMUST00000200621 289 ntBASIC16.06■□□□□ 0.16
Lhx4P53776 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx4P53776 Ninj1-201ENSMUST00000049022 1187 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx4P53776 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx4P53776 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx4P53776 Ehmt2-203ENSMUST00000097342 3934 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx4P53776 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Lhx4P53776 Maf1-205ENSMUST00000160853 1651 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 AA386476-201ENSMUST00000098781 1665 ntBASIC16.05■□□□□ 0.16
Lhx4P53776 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Espn-210ENSMUST00000105656 1593 ntTSL 5 BASIC16.05■□□□□ 0.16
Lhx4P53776 Rab34-202ENSMUST00000056241 1558 ntTSL 5 BASIC16.05■□□□□ 0.16
Lhx4P53776 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
Lhx4P53776 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Anapc1-202ENSMUST00000110332 1214 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC16.05■□□□□ 0.16
Lhx4P53776 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC16.05■□□□□ 0.16
Lhx4P53776 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Mtmr9-201ENSMUST00000058679 2570 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Lhx4P53776 AC165080.2-201ENSMUST00000217491 1530 ntBASIC16.04■□□□□ 0.16
Lhx4P53776 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC16.04■□□□□ 0.16
Lhx4P53776 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Wdfy1-202ENSMUST00000113510 704 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Wdfy1-203ENSMUST00000113511 704 ntTSL 5 BASIC16.04■□□□□ 0.16
Lhx4P53776 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Wdfy1-201ENSMUST00000048820 717 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Lhx4P53776 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Hgsnat-201ENSMUST00000037609 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 AC122335.2-201ENSMUST00000213901 6181 ntBASIC16.04■□□□□ 0.16
Lhx4P53776 Actrt3-201ENSMUST00000047630 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Lhx4P53776 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.03■□□□□ 0.16
Lhx4P53776 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lhx4P53776 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx4P53776 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx4P53776 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC16.03■□□□□ 0.16
Lhx4P53776 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC16.03■□□□□ 0.16
Lhx4P53776 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx4P53776 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx4P53776 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx4P53776 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC16.03■□□□□ 0.16
Lhx4P53776 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx4P53776 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx4P53776 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Lhx4P53776 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Lhx4P53776 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx4P53776 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Lhx4P53776 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx4P53776 Irx3-202ENSMUST00000175795 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx4P53776 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx4P53776 Gm18284-201ENSMUST00000172604 624 ntBASIC16.02■□□□□ 0.16
Lhx4P53776 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC16.02■□□□□ 0.16
Lhx4P53776 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Lhx4P53776 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lhx4P53776 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lhx4P53776 Nadk2-201ENSMUST00000067760 3731 ntAPPRIS P5 TSL 5 BASIC16.02■□□□□ 0.15
Lhx4P53776 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Lhx4P53776 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC16.02■□□□□ 0.15
Lhx4P53776 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lhx4P53776 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Lhx4P53776 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.15
Lhx4P53776 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lhx4P53776 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lhx4P53776 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lhx4P53776 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lhx4P53776 Mfhas1-201ENSMUST00000037666 6408 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lhx4P53776 Gm11421-201ENSMUST00000122124 294 ntBASIC16.01■□□□□ 0.15
Lhx4P53776 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC16.01■□□□□ 0.15
Lhx4P53776 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lhx4P53776 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC16.01■□□□□ 0.15
Lhx4P53776 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lhx4P53776 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Lhx4P53776 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC16.01■□□□□ 0.15
Lhx4P53776 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC16■□□□□ 0.15
Lhx4P53776 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC16■□□□□ 0.15
Lhx4P53776 Luc7l2-201ENSMUST00000057692 2702 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lhx4P53776 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC16■□□□□ 0.15
Lhx4P53776 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
Lhx4P53776 Gm6899-201ENSMUST00000089614 622 ntAPPRIS P1 BASIC16■□□□□ 0.15
Lhx4P53776 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms