Protein–RNA interactions for Protein: P52955

Lbx1, Transcription factor LBX1, mousemouse

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lbx1P52955 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC18.49■□□□□ 0.55
Lbx1P52955 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Lbx1P52955 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Trim3-203ENSMUST00000106791 2466 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Lbx1P52955 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Lbx1P52955 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Lbx1P52955 AC175538.1-201ENSMUST00000225343 1269 ntBASIC18.48■□□□□ 0.55
Lbx1P52955 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lbx1P52955 Dmtn-209ENSMUST00000228295 2572 ntBASIC18.48■□□□□ 0.55
Lbx1P52955 Rasl11b-201ENSMUST00000051937 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lbx1P52955 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lbx1P52955 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Lbx1P52955 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Lbx1P52955 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC18.47■□□□□ 0.55
Lbx1P52955 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lbx1P52955 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC18.47■□□□□ 0.55
Lbx1P52955 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Lbx1P52955 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Lbx1P52955 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.47■□□□□ 0.55
Lbx1P52955 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Lbx1P52955 Gm21814-202ENSMUST00000203277 873 ntBASIC18.47■□□□□ 0.55
Lbx1P52955 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC18.47■□□□□ 0.55
Lbx1P52955 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lbx1P52955 Gm13042-201ENSMUST00000119244 1955 ntBASIC18.47■□□□□ 0.55
Lbx1P52955 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lbx1P52955 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lbx1P52955 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lbx1P52955 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Lbx1P52955 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.47■□□□□ 0.55
Lbx1P52955 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC18.46■□□□□ 0.55
Lbx1P52955 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
Lbx1P52955 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Olfm2-204ENSMUST00000217198 2005 ntAPPRIS ALT2 TSL 3 BASIC18.46■□□□□ 0.55
Lbx1P52955 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Tlcd2-202ENSMUST00000108435 1112 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
Lbx1P52955 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Lbx1P52955 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC18.46■□□□□ 0.55
Lbx1P52955 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC18.46■□□□□ 0.55
Lbx1P52955 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC18.46■□□□□ 0.55
Lbx1P52955 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Igfbp2-201ENSMUST00000047328 1307 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Lbx1P52955 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lbx1P52955 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lbx1P52955 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.54
Lbx1P52955 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lbx1P52955 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lbx1P52955 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC18.45■□□□□ 0.54
Lbx1P52955 Cacng7-201ENSMUST00000092891 2212 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lbx1P52955 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lbx1P52955 Ptf1aos-201ENSMUST00000122978 916 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lbx1P52955 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lbx1P52955 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.45■□□□□ 0.54
Lbx1P52955 Gm6443-201ENSMUST00000203599 874 ntBASIC18.45■□□□□ 0.54
Lbx1P52955 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lbx1P52955 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC18.45■□□□□ 0.54
Lbx1P52955 Amn-201ENSMUST00000021707 1701 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Lbx1P52955 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Lbx1P52955 Eif2ak4-207ENSMUST00000110877 2134 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
Lbx1P52955 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Fastk-201ENSMUST00000030800 1893 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
Lbx1P52955 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Sh3rf3-202ENSMUST00000135526 1940 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Lbx1P52955 Nrl-203ENSMUST00000178694 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Lbx1P52955 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC18.43■□□□□ 0.54
Lbx1P52955 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lbx1P52955 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.43■□□□□ 0.54
Lbx1P52955 AC163280.1-201ENSMUST00000228194 1100 ntBASIC18.43■□□□□ 0.54
Lbx1P52955 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.43■□□□□ 0.54
Lbx1P52955 Cldn23-201ENSMUST00000060128 1848 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Lbx1P52955 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lbx1P52955 Srsf2-201ENSMUST00000092404 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lbx1P52955 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC18.42■□□□□ 0.54
Lbx1P52955 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lbx1P52955 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Lbx1P52955 Gm7284-201ENSMUST00000131667 944 ntBASIC18.42■□□□□ 0.54
Lbx1P52955 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Lbx1P52955 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lbx1P52955 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lbx1P52955 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Lbx1P52955 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 14.7 ms