Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdx1P52946 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdx1P52946 Plekhh1-201ENSMUST00000039928 6439 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdx1P52946 Apoe-205ENSMUST00000173739 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Pdx1P52946 Apoe-209ENSMUST00000174355 1104 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pdx1P52946 Gm27027-201ENSMUST00000183110 547 ntAPPRIS P1 TSL 3 BASIC18.85■□□□□ 0.61
Pdx1P52946 Apoe-201ENSMUST00000003066 1128 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Pdx1P52946 Gm10493-201ENSMUST00000097270 612 ntBASIC18.85■□□□□ 0.61
Pdx1P52946 Brd1-201ENSMUST00000088911 4702 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Pdx1P52946 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC18.84■□□□□ 0.61
Pdx1P52946 Reep4-203ENSMUST00000226563 1444 ntBASIC18.84■□□□□ 0.61
Pdx1P52946 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Pdx1P52946 Il23a-201ENSMUST00000026449 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdx1P52946 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdx1P52946 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC18.84■□□□□ 0.61
Pdx1P52946 Rfc5-202ENSMUST00000111953 772 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdx1P52946 Hist1h2ag-201ENSMUST00000091741 485 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Pdx1P52946 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdx1P52946 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Pdx1P52946 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Pdx1P52946 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Pdx1P52946 Smox-202ENSMUST00000110179 1320 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Pdx1P52946 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdx1P52946 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pdx1P52946 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdx1P52946 1700012B09Rik-204ENSMUST00000191047 654 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
Pdx1P52946 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC18.83■□□□□ 0.6
Pdx1P52946 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdx1P52946 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdx1P52946 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pdx1P52946 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdx1P52946 C230096K16Rik-201ENSMUST00000198074 1722 ntBASIC18.83■□□□□ 0.6
Pdx1P52946 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Pdx1P52946 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Pdx1P52946 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdx1P52946 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdx1P52946 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC18.82■□□□□ 0.6
Pdx1P52946 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Pdx1P52946 Grifin-201ENSMUST00000042993 613 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdx1P52946 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdx1P52946 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Pdx1P52946 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Pdx1P52946 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 Carm1-202ENSMUST00000115394 3320 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Pdx1P52946 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC18.81■□□□□ 0.6
Pdx1P52946 AC099934.2-201ENSMUST00000196389 70 ntBASIC18.81■□□□□ 0.6
Pdx1P52946 AC156953.1-201ENSMUST00000196953 70 ntBASIC18.81■□□□□ 0.6
Pdx1P52946 AC157822.2-201ENSMUST00000200291 70 ntBASIC18.81■□□□□ 0.6
Pdx1P52946 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
Pdx1P52946 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Pdx1P52946 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC18.81■□□□□ 0.6
Pdx1P52946 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Pdx1P52946 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdx1P52946 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdx1P52946 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdx1P52946 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdx1P52946 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Pdx1P52946 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdx1P52946 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Pdx1P52946 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC18.79■□□□□ 0.6
Pdx1P52946 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Pdx1P52946 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdx1P52946 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdx1P52946 Gm5874-201ENSMUST00000096101 508 ntBASIC18.79■□□□□ 0.6
Pdx1P52946 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
Pdx1P52946 Dusp14-202ENSMUST00000100705 1447 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdx1P52946 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Pdx1P52946 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdx1P52946 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdx1P52946 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdx1P52946 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdx1P52946 1700028E10Rik-201ENSMUST00000181114 2034 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Pdx1P52946 Gm18688-201ENSMUST00000204695 1859 ntBASIC18.78■□□□□ 0.6
Pdx1P52946 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.78■□□□□ 0.6
Pdx1P52946 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC18.78■□□□□ 0.6
Pdx1P52946 AC124603.1-201ENSMUST00000223843 308 ntBASIC18.78■□□□□ 0.6
Pdx1P52946 Nrxn2-201ENSMUST00000077182 6059 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Pdx1P52946 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdx1P52946 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Pdx1P52946 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdx1P52946 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Pdx1P52946 Krt87-201ENSMUST00000081945 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdx1P52946 Pqlc3-201ENSMUST00000054536 1928 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdx1P52946 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdx1P52946 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdx1P52946 Gm18284-201ENSMUST00000172604 624 ntBASIC18.77■□□□□ 0.6
Pdx1P52946 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdx1P52946 Ahcyl1-201ENSMUST00000029490 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Pdx1P52946 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdx1P52946 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdx1P52946 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Pdx1P52946 Lrp8-204ENSMUST00000106733 3332 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 20.3 ms