Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Ghitm-201ENSMUST00000042564 2573 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RoraP51448 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RoraP51448 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RoraP51448 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RoraP51448 5033417F24Rik-201ENSMUST00000181575 1787 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RoraP51448 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RoraP51448 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.98■□□□□ 0.47
RoraP51448 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC17.98■□□□□ 0.47
RoraP51448 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RoraP51448 Ap1ar-201ENSMUST00000051737 2662 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
RoraP51448 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC17.97■□□□□ 0.47
RoraP51448 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RoraP51448 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RoraP51448 Gm13534-201ENSMUST00000121169 513 ntBASIC17.97■□□□□ 0.47
RoraP51448 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RoraP51448 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RoraP51448 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RoraP51448 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
RoraP51448 Zcchc24-201ENSMUST00000069180 4556 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RoraP51448 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RoraP51448 Zyg11a-202ENSMUST00000106690 2421 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
RoraP51448 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC17.96■□□□□ 0.47
RoraP51448 Kl-201ENSMUST00000078856 5118 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RoraP51448 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RoraP51448 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RoraP51448 Iqck-206ENSMUST00000208658 2891 ntBASIC17.96■□□□□ 0.47
RoraP51448 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC17.96■□□□□ 0.47
RoraP51448 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RoraP51448 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RoraP51448 Cobll1-202ENSMUST00000102726 5031 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RoraP51448 Cobll1-203ENSMUST00000112429 5045 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RoraP51448 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RoraP51448 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RoraP51448 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RoraP51448 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.46
RoraP51448 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RoraP51448 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RoraP51448 Nudt14-202ENSMUST00000221397 1241 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RoraP51448 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RoraP51448 Bspry-202ENSMUST00000107449 2167 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RoraP51448 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RoraP51448 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC17.95■□□□□ 0.46
RoraP51448 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RoraP51448 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RoraP51448 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RoraP51448 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RoraP51448 2310022B05Rik-201ENSMUST00000034464 3307 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RoraP51448 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
RoraP51448 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.94■□□□□ 0.46
RoraP51448 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RoraP51448 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RoraP51448 Gm34220-201ENSMUST00000223001 2709 ntBASIC17.94■□□□□ 0.46
RoraP51448 Tead1-204ENSMUST00000106638 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RoraP51448 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC17.94■□□□□ 0.46
RoraP51448 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RoraP51448 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
RoraP51448 Mir5133-201ENSMUST00000174955 77 ntBASIC17.93■□□□□ 0.46
RoraP51448 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC17.93■□□□□ 0.46
RoraP51448 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC17.93■□□□□ 0.46
RoraP51448 Gm27011-201ENSMUST00000182352 972 ntBASIC17.93■□□□□ 0.46
RoraP51448 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC17.93■□□□□ 0.46
RoraP51448 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RoraP51448 Ttc39a-203ENSMUST00000106619 1778 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
RoraP51448 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
RoraP51448 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RoraP51448 Gm10655-201ENSMUST00000098658 1397 ntBASIC17.92■□□□□ 0.46
RoraP51448 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
RoraP51448 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RoraP51448 Gm7860-201ENSMUST00000121190 879 ntBASIC17.92■□□□□ 0.46
RoraP51448 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC17.92■□□□□ 0.46
RoraP51448 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RoraP51448 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RoraP51448 Galnt11-201ENSMUST00000045737 2552 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RoraP51448 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
RoraP51448 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
RoraP51448 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC17.92■□□□□ 0.46
RoraP51448 Etnk1-203ENSMUST00000204947 1791 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RoraP51448 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
RoraP51448 Dtx4-201ENSMUST00000045521 5765 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RoraP51448 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RoraP51448 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RoraP51448 Hoxb6-201ENSMUST00000000704 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
RoraP51448 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
RoraP51448 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RoraP51448 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
RoraP51448 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC17.9■□□□□ 0.46
RoraP51448 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RoraP51448 Bend3-202ENSMUST00000167488 6337 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
RoraP51448 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RoraP51448 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
RoraP51448 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
RoraP51448 Gm6420-201ENSMUST00000193885 723 ntBASIC17.9■□□□□ 0.46
RoraP51448 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
RoraP51448 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RoraP51448 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
RoraP51448 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC17.89■□□□□ 0.46
RoraP51448 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
RoraP51448 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
RoraP51448 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.89■□□□□ 0.45
RoraP51448 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms