Protein–RNA interactions for Protein: P50405

Sftpb, Pulmonary surfactant-associated protein B, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SftpbP50405 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpbP50405 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SftpbP50405 4930412F12Rik-201ENSMUST00000211700 1471 ntBASIC19.43■□□□□ 0.7
SftpbP50405 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpbP50405 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
SftpbP50405 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpbP50405 Dtymk-202ENSMUST00000112890 1055 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SftpbP50405 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.43■□□□□ 0.7
SftpbP50405 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpbP50405 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpbP50405 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.43■□□□□ 0.7
SftpbP50405 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
SftpbP50405 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
SftpbP50405 Mgea5-201ENSMUST00000026243 5024 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
SftpbP50405 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
SftpbP50405 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpbP50405 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpbP50405 Gabarapl1-201ENSMUST00000032264 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpbP50405 Kiz-201ENSMUST00000099278 2183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpbP50405 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpbP50405 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpbP50405 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC19.42■□□□□ 0.7
SftpbP50405 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
SftpbP50405 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC19.41■□□□□ 0.7
SftpbP50405 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.41■□□□□ 0.7
SftpbP50405 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 0610010K14Rik-209ENSMUST00000108579 667 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC19.41■□□□□ 0.7
SftpbP50405 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SftpbP50405 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 Bhlhe22-201ENSMUST00000026120 3344 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SftpbP50405 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SftpbP50405 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
SftpbP50405 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC19.41■□□□□ 0.7
SftpbP50405 Dyrk1b-203ENSMUST00000172761 2018 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SftpbP50405 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SftpbP50405 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpbP50405 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpbP50405 Pknox1-203ENSMUST00000175806 2272 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpbP50405 Dleu2-203ENSMUST00000182259 1437 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SftpbP50405 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpbP50405 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SftpbP50405 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
SftpbP50405 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC19.39■□□□□ 0.69
SftpbP50405 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Rbm18-201ENSMUST00000028251 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SftpbP50405 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Btnl9-202ENSMUST00000066531 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Tnfsf11-201ENSMUST00000022592 2236 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SftpbP50405 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 BC021767-201ENSMUST00000126387 1716 ntBASIC19.38■□□□□ 0.69
SftpbP50405 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.38■□□□□ 0.69
SftpbP50405 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC19.38■□□□□ 0.69
SftpbP50405 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 1110065P20Rik-206ENSMUST00000185036 1223 ntTSL 2 BASIC19.38■□□□□ 0.69
SftpbP50405 Srp68-201ENSMUST00000021133 2526 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Wdr41-208ENSMUST00000222995 1112 ntTSL 5 BASIC19.38■□□□□ 0.69
SftpbP50405 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Bcl2l10-201ENSMUST00000034709 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Gm9847-201ENSMUST00000052528 599 ntBASIC19.38■□□□□ 0.69
SftpbP50405 Gm5576-201ENSMUST00000075809 1236 ntBASIC19.38■□□□□ 0.69
SftpbP50405 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Nbn-201ENSMUST00000029879 2533 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SftpbP50405 Tmem79-203ENSMUST00000107553 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 0610010K14Rik-208ENSMUST00000108578 880 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Gm9922-201ENSMUST00000066461 435 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
SftpbP50405 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 St3gal3-201ENSMUST00000030263 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
SftpbP50405 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SftpbP50405 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms