Protein–RNA interactions for Protein: P48678

Lmna, Prelamin-A/C, mousemouse

Known RBP Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LmnaP48678 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LmnaP48678 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.65■□□□□ 0.74
LmnaP48678 Setd4-202ENSMUST00000113951 1826 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LmnaP48678 Gjc2-202ENSMUST00000108793 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
LmnaP48678 Trp73os-201ENSMUST00000143429 2192 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
LmnaP48678 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
LmnaP48678 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LmnaP48678 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
LmnaP48678 Gm12527-201ENSMUST00000117967 564 ntBASIC19.64■□□□□ 0.73
LmnaP48678 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC19.64■□□□□ 0.73
LmnaP48678 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC19.64■□□□□ 0.73
LmnaP48678 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.64■□□□□ 0.73
LmnaP48678 AC135963.1-201ENSMUST00000211640 717 ntBASIC19.64■□□□□ 0.73
LmnaP48678 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LmnaP48678 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LmnaP48678 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC19.64■□□□□ 0.73
LmnaP48678 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LmnaP48678 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
LmnaP48678 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
LmnaP48678 Aplf-201ENSMUST00000032130 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LmnaP48678 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LmnaP48678 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LmnaP48678 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC19.63■□□□□ 0.73
LmnaP48678 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC19.63■□□□□ 0.73
LmnaP48678 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LmnaP48678 Bsg-205ENSMUST00000179781 1261 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LmnaP48678 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC19.63■□□□□ 0.73
LmnaP48678 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LmnaP48678 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
LmnaP48678 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LmnaP48678 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LmnaP48678 Reep4-203ENSMUST00000226563 1444 ntBASIC19.62■□□□□ 0.73
LmnaP48678 Gm13168-201ENSMUST00000121771 632 ntBASIC19.62■□□□□ 0.73
LmnaP48678 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
LmnaP48678 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.62■□□□□ 0.73
LmnaP48678 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.62■□□□□ 0.73
LmnaP48678 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
LmnaP48678 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
LmnaP48678 Gm15441-202ENSMUST00000107095 1653 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
LmnaP48678 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC19.62■□□□□ 0.73
LmnaP48678 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Rer1-201ENSMUST00000030914 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
LmnaP48678 Rasgrp2-206ENSMUST00000113472 2124 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Tex264-202ENSMUST00000163441 1896 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Gm14281-201ENSMUST00000121700 1294 ntBASIC19.61■□□□□ 0.73
LmnaP48678 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Gtpbp2-217ENSMUST00000172170 2587 ntTSL 5 BASIC19.61■□□□□ 0.73
LmnaP48678 Tfap2e-201ENSMUST00000048194 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 Evi5l-209ENSMUST00000177053 1542 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
LmnaP48678 0610038B21Rik-202ENSMUST00000184762 1524 ntBASIC19.61■□□□□ 0.73
LmnaP48678 Tmem86a-201ENSMUST00000010451 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Gjc2-201ENSMUST00000108790 2169 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Rhbdd3-201ENSMUST00000036320 1790 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 2310035C23Rik-202ENSMUST00000086721 5414 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
LmnaP48678 AA543186-201ENSMUST00000180841 1696 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.6■□□□□ 0.73
LmnaP48678 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.6■□□□□ 0.73
LmnaP48678 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
LmnaP48678 Gm10812-201ENSMUST00000099864 546 ntBASIC19.6■□□□□ 0.73
LmnaP48678 Ankrd33b-202ENSMUST00000076942 1641 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Klhl8-201ENSMUST00000031254 3193 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Tmprss5-205ENSMUST00000170246 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Letm2-201ENSMUST00000079160 2126 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
LmnaP48678 Pank2-204ENSMUST00000150843 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LmnaP48678 Kcnip1-201ENSMUST00000065970 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LmnaP48678 Zbed3-202ENSMUST00000221807 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LmnaP48678 Stau2-201ENSMUST00000027052 2763 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
LmnaP48678 Jkamp-202ENSMUST00000117449 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
LmnaP48678 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
LmnaP48678 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LmnaP48678 Fam207a-201ENSMUST00000045454 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LmnaP48678 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.59■□□□□ 0.73
LmnaP48678 Gm27045-201ENSMUST00000182145 1402 ntBASIC19.59■□□□□ 0.73
LmnaP48678 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
LmnaP48678 Pelo-201ENSMUST00000109226 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
LmnaP48678 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
LmnaP48678 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.73
LmnaP48678 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
LmnaP48678 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.72
LmnaP48678 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC19.58■□□□□ 0.72
LmnaP48678 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LmnaP48678 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
LmnaP48678 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC19.58■□□□□ 0.72
LmnaP48678 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
LmnaP48678 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LmnaP48678 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LmnaP48678 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
LmnaP48678 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
LmnaP48678 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
LmnaP48678 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms