Protein–RNA interactions for Protein: P48379

Rfx2, DNA-binding protein RFX2, mousemouse

Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx2P48379 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx2P48379 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx2P48379 Lypd3-201ENSMUST00000080718 1649 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx2P48379 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx2P48379 Zbtb7a-204ENSMUST00000121840 1676 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Rfx2P48379 A930001C03Rik-204ENSMUST00000154407 1402 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx2P48379 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
Rfx2P48379 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx2P48379 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.93■□□□□ 0.78
Rfx2P48379 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx2P48379 Aurkaip1-203ENSMUST00000105592 1029 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Rfx2P48379 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Rfx2P48379 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.93■□□□□ 0.78
Rfx2P48379 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx2P48379 Gm10602-201ENSMUST00000098239 609 ntBASIC19.93■□□□□ 0.78
Rfx2P48379 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Rfx2P48379 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx2P48379 Gm12933-201ENSMUST00000120203 872 ntBASIC19.92■□□□□ 0.78
Rfx2P48379 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.92■□□□□ 0.78
Rfx2P48379 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC19.92■□□□□ 0.78
Rfx2P48379 Mrpl52-204ENSMUST00000199195 463 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx2P48379 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rfx2P48379 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC19.92■□□□□ 0.78
Rfx2P48379 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx2P48379 Smap2-201ENSMUST00000043200 2905 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx2P48379 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx2P48379 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Rfx2P48379 Fam105a-202ENSMUST00000226145 2950 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Rfx2P48379 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.92■□□□□ 0.78
Rfx2P48379 Lefty1-201ENSMUST00000037361 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx2P48379 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx2P48379 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx2P48379 AI507597-201ENSMUST00000140726 880 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx2P48379 Gon7-202ENSMUST00000179263 525 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx2P48379 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC19.91■□□□□ 0.78
Rfx2P48379 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx2P48379 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx2P48379 Creb3l1-201ENSMUST00000028663 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx2P48379 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Rfx2P48379 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC19.91■□□□□ 0.78
Rfx2P48379 Golph3-205ENSMUST00000228671 2842 ntBASIC19.91■□□□□ 0.78
Rfx2P48379 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Stk11-201ENSMUST00000003152 2566 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC19.9■□□□□ 0.78
Rfx2P48379 Slc35a3-201ENSMUST00000029569 5725 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Dnajb11-201ENSMUST00000004574 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.9■□□□□ 0.78
Rfx2P48379 Gm7514-201ENSMUST00000209475 934 ntBASIC19.9■□□□□ 0.78
Rfx2P48379 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Pomgnt1-203ENSMUST00000106498 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Rfx2P48379 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx2P48379 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx2P48379 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Rfx2P48379 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Gm42911-201ENSMUST00000199360 1630 ntBASIC19.88■□□□□ 0.77
Rfx2P48379 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Med30-201ENSMUST00000037115 1007 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Sohlh1-201ENSMUST00000076989 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Rfx2P48379 Uncx-202ENSMUST00000174792 1196 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx2P48379 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx2P48379 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.87■□□□□ 0.77
Rfx2P48379 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx2P48379 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx2P48379 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx2P48379 AA386476-201ENSMUST00000098781 1665 ntBASIC19.87■□□□□ 0.77
Rfx2P48379 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx2P48379 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx2P48379 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Rfx2P48379 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx2P48379 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx2P48379 Hoxa11os-201ENSMUST00000134512 1839 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx2P48379 Gm11627-201ENSMUST00000107080 585 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx2P48379 Gm12216-203ENSMUST00000121435 655 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Rfx2P48379 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.86■□□□□ 0.77
Rfx2P48379 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.86■□□□□ 0.77
Rfx2P48379 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx2P48379 Ankrd40-203ENSMUST00000107818 3487 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
Rfx2P48379 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx2P48379 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx2P48379 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Rfx2P48379 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx2P48379 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx2P48379 Sfmbt2-204ENSMUST00000114864 1901 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx2P48379 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Rfx2P48379 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.85■□□□□ 0.77
Rfx2P48379 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.85■□□□□ 0.77
Rfx2P48379 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms