Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Kiss1-205ENSMUST00000195286 656 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Usp21-201ENSMUST00000065941 2219 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 AA386476-201ENSMUST00000098781 1665 ntBASIC15.67■□□□□ 0.1
Hist1h1aP43275 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Hist1h1aP43275 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Derl2-207ENSMUST00000171041 1466 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Ltbr-201ENSMUST00000032489 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Cacnb3-201ENSMUST00000003442 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Cetn4-205ENSMUST00000140956 2981 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Hist1h1aP43275 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Polr3h-201ENSMUST00000023113 2514 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Larp6-201ENSMUST00000038407 2440 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Gm16192-201ENSMUST00000148357 937 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Rps24-207ENSMUST00000224568 714 ntBASIC15.65■□□□□ 0.1
Hist1h1aP43275 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Hist1h1aP43275 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.1
Hist1h1aP43275 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Snx21-206ENSMUST00000174070 1446 ntTSL 5 BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Gm6085-201ENSMUST00000182774 1470 ntBASIC15.64■□□□□ 0.09
Hist1h1aP43275 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
Hist1h1aP43275 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Gmds-201ENSMUST00000041859 1713 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Phldb3-204ENSMUST00000206422 2564 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 1700016H13Rik-203ENSMUST00000120108 797 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Dbnl-201ENSMUST00000020769 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Nxph4-201ENSMUST00000095266 1675 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Hist1h1aP43275 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.63■□□□□ 0.09
Hist1h1aP43275 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist1h1aP43275 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hist1h1aP43275 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist1h1aP43275 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Hist1h1aP43275 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist1h1aP43275 Gm14117-201ENSMUST00000122417 843 ntBASIC15.62■□□□□ 0.09
Hist1h1aP43275 Gm45102-201ENSMUST00000207427 857 ntBASIC15.62■□□□□ 0.09
Hist1h1aP43275 Ankrd9-204ENSMUST00000140788 1451 ntAPPRIS P2 TSL 3 BASIC15.62■□□□□ 0.09
Hist1h1aP43275 Dus3l-201ENSMUST00000007747 2303 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist1h1aP43275 Rarb-207ENSMUST00000225921 2756 ntBASIC15.62■□□□□ 0.09
Hist1h1aP43275 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist1h1aP43275 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Hist1h1aP43275 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Nr4a1-201ENSMUST00000023779 2474 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Hist1h1aP43275 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms