Protein–RNA interactions for Protein: P43028

Gdf6, Growth/differentiation factor 6, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gdf6P43028 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gdf6P43028 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gdf6P43028 Gm45640-201ENSMUST00000210665 1896 ntBASIC20.1■□□□□ 0.81
Gdf6P43028 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gdf6P43028 Gm6211-202ENSMUST00000167849 925 ntBASIC20.1■□□□□ 0.81
Gdf6P43028 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Gdf6P43028 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gdf6P43028 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gdf6P43028 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.1■□□□□ 0.81
Gdf6P43028 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
Gdf6P43028 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Gdf6P43028 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Gdf6P43028 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Gdf6P43028 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Gdf6P43028 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gdf6P43028 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gdf6P43028 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gdf6P43028 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gdf6P43028 Tmem79-202ENSMUST00000107552 2063 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Gdf6P43028 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Gdf6P43028 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC20.08■□□□□ 0.81
Gdf6P43028 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gdf6P43028 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC20.08■□□□□ 0.81
Gdf6P43028 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Gdf6P43028 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Gdf6P43028 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gdf6P43028 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gdf6P43028 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gdf6P43028 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC20.08■□□□□ 0.81
Gdf6P43028 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.08■□□□□ 0.81
Gdf6P43028 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC20.08■□□□□ 0.81
Gdf6P43028 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC20.08■□□□□ 0.81
Gdf6P43028 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
Gdf6P43028 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gdf6P43028 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gdf6P43028 Gm43859-201ENSMUST00000200075 1412 ntBASIC20.08■□□□□ 0.8
Gdf6P43028 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gdf6P43028 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Gdf6P43028 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC20.07■□□□□ 0.8
Gdf6P43028 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Gm5408-201ENSMUST00000197998 747 ntBASIC20.07■□□□□ 0.8
Gdf6P43028 Lpcat3-201ENSMUST00000004381 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Arfrp1-203ENSMUST00000127988 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Gdf6P43028 Kif27-203ENSMUST00000225388 5121 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gdf6P43028 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gdf6P43028 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gdf6P43028 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gdf6P43028 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gdf6P43028 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Gdf6P43028 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
Gdf6P43028 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gdf6P43028 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Gdf6P43028 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Gdf6P43028 Gm16933-201ENSMUST00000141741 2169 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Gdf6P43028 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.05■□□□□ 0.8
Gdf6P43028 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.05■□□□□ 0.8
Gdf6P43028 Kifc3-201ENSMUST00000034240 3277 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.05■□□□□ 0.8
Gdf6P43028 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Gdf6P43028 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Gdf6P43028 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gdf6P43028 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gdf6P43028 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Gdf6P43028 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gdf6P43028 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gdf6P43028 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
Gdf6P43028 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Gdf6P43028 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.04■□□□□ 0.8
Gdf6P43028 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
Gdf6P43028 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.04■□□□□ 0.8
Gdf6P43028 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gdf6P43028 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.04■□□□□ 0.8
Gdf6P43028 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
Gdf6P43028 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gdf6P43028 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gdf6P43028 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Gdf6P43028 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gdf6P43028 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gdf6P43028 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Gdf6P43028 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC20.03■□□□□ 0.8
Gdf6P43028 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Gdf6P43028 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Gdf6P43028 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms