Protein–RNA interactions for Protein: P35242

Sftpa1, Pulmonary surfactant-associated protein A, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sftpa1P35242 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sftpa1P35242 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC17.65■□□□□ 0.42
Sftpa1P35242 Gm2559-201ENSMUST00000201323 363 ntBASIC17.65■□□□□ 0.42
Sftpa1P35242 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Sftpa1P35242 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Sftpa1P35242 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Sftpa1P35242 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC17.65■□□□□ 0.42
Sftpa1P35242 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Sftpa1P35242 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.64■□□□□ 0.41
Sftpa1P35242 Rhob-201ENSMUST00000067384 2349 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sftpa1P35242 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
Sftpa1P35242 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sftpa1P35242 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Sftpa1P35242 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC17.64■□□□□ 0.41
Sftpa1P35242 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
Sftpa1P35242 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sftpa1P35242 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sftpa1P35242 Bfsp1-202ENSMUST00000099296 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Sftpa1P35242 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sftpa1P35242 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Sftpa1P35242 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sftpa1P35242 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sftpa1P35242 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC17.63■□□□□ 0.41
Sftpa1P35242 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC17.63■□□□□ 0.41
Sftpa1P35242 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Sftpa1P35242 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Sftpa1P35242 Dscam-201ENSMUST00000056102 7498 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sftpa1P35242 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sftpa1P35242 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Sftpa1P35242 Fam60a-202ENSMUST00000081956 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sftpa1P35242 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC17.62■□□□□ 0.41
Sftpa1P35242 Gm15565-201ENSMUST00000118890 427 ntBASIC17.62■□□□□ 0.41
Sftpa1P35242 Gm26879-201ENSMUST00000181127 1176 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Sftpa1P35242 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.62■□□□□ 0.41
Sftpa1P35242 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC17.62■□□□□ 0.41
Sftpa1P35242 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sftpa1P35242 Sult4a1-201ENSMUST00000082365 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sftpa1P35242 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
Sftpa1P35242 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sftpa1P35242 Dio3-201ENSMUST00000097228 1449 ntBASIC17.62■□□□□ 0.41
Sftpa1P35242 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Sftpa1P35242 Nkd1-203ENSMUST00000211113 1474 ntTSL 5 BASIC17.62■□□□□ 0.41
Sftpa1P35242 Gm37035-201ENSMUST00000194809 2148 ntBASIC17.62■□□□□ 0.41
Sftpa1P35242 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Sftpa1P35242 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Sftpa1P35242 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.61■□□□□ 0.41
Sftpa1P35242 Insig2-203ENSMUST00000159085 1252 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
Sftpa1P35242 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Sftpa1P35242 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Sftpa1P35242 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Otud5-203ENSMUST00000115666 2471 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Sftpa1P35242 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sftpa1P35242 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sftpa1P35242 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Sftpa1P35242 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC17.6■□□□□ 0.41
Sftpa1P35242 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sftpa1P35242 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sftpa1P35242 Slbp-201ENSMUST00000057551 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sftpa1P35242 Spry1-203ENSMUST00000108109 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sftpa1P35242 Spry1-201ENSMUST00000038569 2481 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sftpa1P35242 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Sftpa1P35242 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.6■□□□□ 0.41
Sftpa1P35242 Prdm13-201ENSMUST00000076206 2993 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Sftpa1P35242 Unc5b-201ENSMUST00000077925 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sftpa1P35242 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sftpa1P35242 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Sftpa1P35242 Tnnt2-202ENSMUST00000112085 1076 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Gm26971-201ENSMUST00000182423 1072 ntBASIC17.59■□□□□ 0.41
Sftpa1P35242 Gm10698-201ENSMUST00000182663 604 ntBASIC17.59■□□□□ 0.41
Sftpa1P35242 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Tnnt2-212ENSMUST00000189732 1123 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sftpa1P35242 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Sftpa1P35242 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Sftpa1P35242 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
Sftpa1P35242 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Sftpa1P35242 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms