Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RxrbP28704 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
RxrbP28704 Plk3-201ENSMUST00000076859 2378 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RxrbP28704 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RxrbP28704 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC19.19■□□□□ 0.66
RxrbP28704 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RxrbP28704 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
RxrbP28704 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RxrbP28704 Gng12-202ENSMUST00000114222 1354 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
RxrbP28704 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RxrbP28704 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RxrbP28704 Gorasp2-202ENSMUST00000112201 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RxrbP28704 AB124611-203ENSMUST00000173769 1188 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
RxrbP28704 Lrrc57-204ENSMUST00000102499 1961 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RxrbP28704 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
RxrbP28704 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.18■□□□□ 0.66
RxrbP28704 Gm43213-201ENSMUST00000151866 1790 ntBASIC19.18■□□□□ 0.66
RxrbP28704 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
RxrbP28704 Gm10571-201ENSMUST00000097869 1638 ntBASIC19.18■□□□□ 0.66
RxrbP28704 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
RxrbP28704 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Xkr4-201ENSMUST00000070533 3634 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Tpra1-201ENSMUST00000055022 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 2900079G21Rik-201ENSMUST00000139552 1139 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Dusp28-201ENSMUST00000060913 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
RxrbP28704 Krcc1-203ENSMUST00000204436 1687 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
RxrbP28704 Mfsd4a-202ENSMUST00000112365 1536 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RxrbP28704 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
RxrbP28704 Lmtk3-201ENSMUST00000072580 4807 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
RxrbP28704 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RxrbP28704 Yjefn3-202ENSMUST00000152938 785 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
RxrbP28704 Sumf1-203ENSMUST00000167338 1044 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
RxrbP28704 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
RxrbP28704 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
RxrbP28704 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RxrbP28704 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RxrbP28704 Vapa-201ENSMUST00000024897 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RxrbP28704 Dleu2-211ENSMUST00000183066 788 ntTSL 3 BASIC19.15■□□□□ 0.66
RxrbP28704 Kiss1-203ENSMUST00000193888 624 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
RxrbP28704 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.15■□□□□ 0.66
RxrbP28704 Gm43702-201ENSMUST00000198772 2546 ntBASIC19.15■□□□□ 0.66
RxrbP28704 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
RxrbP28704 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RxrbP28704 Fkbp1a-201ENSMUST00000044011 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RxrbP28704 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RxrbP28704 Insig2-201ENSMUST00000003818 2697 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RxrbP28704 Smkr-ps-202ENSMUST00000141679 901 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RxrbP28704 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC19.14■□□□□ 0.65
RxrbP28704 Tusc2-203ENSMUST00000193418 410 ntTSL 3 BASIC19.14■□□□□ 0.65
RxrbP28704 Rps19bp1-201ENSMUST00000052499 830 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RxrbP28704 Acbd6-203ENSMUST00000097529 1255 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RxrbP28704 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RxrbP28704 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RxrbP28704 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Nrros-203ENSMUST00000115165 2389 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Gm14205-201ENSMUST00000138427 739 ntTSL 3 BASIC19.13■□□□□ 0.65
RxrbP28704 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Sc5d-202ENSMUST00000169609 1677 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RxrbP28704 Lrch3-208ENSMUST00000165616 1875 ntTSL 5 BASIC19.13■□□□□ 0.65
RxrbP28704 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC19.13■□□□□ 0.65
RxrbP28704 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RxrbP28704 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RxrbP28704 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC19.12■□□□□ 0.65
RxrbP28704 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RxrbP28704 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RxrbP28704 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RxrbP28704 Gm11691-201ENSMUST00000130963 658 ntTSL 2 BASIC19.12■□□□□ 0.65
RxrbP28704 Gm9959-201ENSMUST00000068277 390 ntBASIC19.12■□□□□ 0.65
RxrbP28704 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
RxrbP28704 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RxrbP28704 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RxrbP28704 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.11■□□□□ 0.65
RxrbP28704 A030001D20Rik-201ENSMUST00000211533 1542 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RxrbP28704 Arhgap27-202ENSMUST00000092557 1504 ntTSL 2 BASIC19.11■□□□□ 0.65
RxrbP28704 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RxrbP28704 Gm6085-201ENSMUST00000182774 1470 ntBASIC19.11■□□□□ 0.65
RxrbP28704 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RxrbP28704 Ache-202ENSMUST00000085934 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RxrbP28704 Gm22238-201ENSMUST00000175222 88 ntBASIC19.11■□□□□ 0.65
RxrbP28704 Pigx-211ENSMUST00000189013 982 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RxrbP28704 Pigx-201ENSMUST00000096109 993 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
RxrbP28704 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RxrbP28704 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC19.11■□□□□ 0.65
RxrbP28704 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
RxrbP28704 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.1■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 10.7 ms