Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.5■□□□□ 0.39
Cd40lgP27548 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40lgP27548 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.5■□□□□ 0.39
Cd40lgP27548 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40lgP27548 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40lgP27548 Rab28-203ENSMUST00000201422 1697 ntTSL 5 BASIC17.5■□□□□ 0.39
Cd40lgP27548 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC17.5■□□□□ 0.39
Cd40lgP27548 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40lgP27548 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40lgP27548 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40lgP27548 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cd40lgP27548 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40lgP27548 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cd40lgP27548 Cacnb1-203ENSMUST00000103144 2236 ntTSL 5 BASIC17.49■□□□□ 0.39
Cd40lgP27548 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Zmym3-202ENSMUST00000117637 1593 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
Cd40lgP27548 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Gm29430-202ENSMUST00000191453 2015 ntTSL 5 BASIC17.49■□□□□ 0.39
Cd40lgP27548 Golph3-202ENSMUST00000226517 2359 ntBASIC17.49■□□□□ 0.39
Cd40lgP27548 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.49■□□□□ 0.39
Cd40lgP27548 Mrpl2-201ENSMUST00000002844 1031 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Fam58b-201ENSMUST00000059468 1224 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cd40lgP27548 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Olfm1-204ENSMUST00000113920 2513 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cd40lgP27548 Parp12-201ENSMUST00000038398 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40lgP27548 Bcl9l-206ENSMUST00000220303 5760 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40lgP27548 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40lgP27548 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40lgP27548 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40lgP27548 Gm18284-201ENSMUST00000172604 624 ntBASIC17.48■□□□□ 0.39
Cd40lgP27548 Zfp105-201ENSMUST00000051667 2010 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40lgP27548 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cd40lgP27548 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cd40lgP27548 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Gp1bb-202ENSMUST00000167388 1847 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
Cd40lgP27548 Dusp22-203ENSMUST00000110310 2319 ntTSL 2 BASIC17.47■□□□□ 0.39
Cd40lgP27548 Ank1-203ENSMUST00000110688 7206 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Gm5874-201ENSMUST00000096101 508 ntBASIC17.47■□□□□ 0.39
Cd40lgP27548 AA386476-201ENSMUST00000098781 1665 ntBASIC17.47■□□□□ 0.39
Cd40lgP27548 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Cd40lgP27548 Tatdn2-201ENSMUST00000089018 3096 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40lgP27548 Ubxn2a-201ENSMUST00000020962 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40lgP27548 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Cd40lgP27548 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40lgP27548 Gm10461-201ENSMUST00000202073 4786 ntBASIC17.46■□□□□ 0.39
Cd40lgP27548 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Cd40lgP27548 Gm8495-201ENSMUST00000188740 694 ntBASIC17.46■□□□□ 0.39
Cd40lgP27548 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40lgP27548 Gm10493-201ENSMUST00000097270 612 ntBASIC17.46■□□□□ 0.39
Cd40lgP27548 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40lgP27548 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Cd40lgP27548 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40lgP27548 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Cd40lgP27548 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cd40lgP27548 Hoxa5-201ENSMUST00000048794 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Cd40lgP27548 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Gm27801-201ENSMUST00000184174 223 ntBASIC17.45■□□□□ 0.38
Cd40lgP27548 AV026068-208ENSMUST00000189098 286 ntTSL 5 BASIC17.45■□□□□ 0.38
Cd40lgP27548 Gm42778-201ENSMUST00000199644 553 ntBASIC17.45■□□□□ 0.38
Cd40lgP27548 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Snx5-202ENSMUST00000110030 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Cd40lgP27548 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40lgP27548 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40lgP27548 Gnas-205ENSMUST00000109083 730 ntTSL 2 BASIC17.44■□□□□ 0.38
Cd40lgP27548 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Cd40lgP27548 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40lgP27548 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40lgP27548 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Cd40lgP27548 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40lgP27548 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Cd40lgP27548 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40lgP27548 Runx2-207ENSMUST00000160673 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40lgP27548 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40lgP27548 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40lgP27548 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Cd40lgP27548 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.43■□□□□ 0.38
Cd40lgP27548 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Cd40lgP27548 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Cd40lgP27548 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 45.7 ms