Protein–RNA interactions for Protein: P25119

Tnfrsf1b, Tumor necrosis factor receptor superfamily member 1B, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1bP25119 Gm18671-201ENSMUST00000214826 683 ntBASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Golph3-202ENSMUST00000226517 2359 ntBASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Fyn-204ENSMUST00000126486 2495 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Tnfrsf1bP25119 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Rusc2-201ENSMUST00000035645 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Kndc1-202ENSMUST00000121839 2210 ntTSL 2 BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Gm38165-201ENSMUST00000191654 486 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Msantd1-203ENSMUST00000202205 744 ntTSL 2 BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Jmjd7-201ENSMUST00000044675 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Adcy3-202ENSMUST00000124505 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Tnfrsf1bP25119 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1bP25119 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1bP25119 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1bP25119 Yjefn3-203ENSMUST00000180068 629 ntTSL 5 BASIC17.61■□□□□ 0.41
Tnfrsf1bP25119 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1bP25119 Capzb-204ENSMUST00000102508 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1bP25119 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1bP25119 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1bP25119 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Tnfrsf1bP25119 Gar1-201ENSMUST00000029643 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1bP25119 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1bP25119 Sfr1-201ENSMUST00000099353 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1bP25119 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Tnfrsf1bP25119 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1bP25119 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Tnfrsf1bP25119 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1bP25119 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.6■□□□□ 0.41
Tnfrsf1bP25119 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Fpgs-201ENSMUST00000028148 2273 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 AV026068-204ENSMUST00000186214 633 ntTSL 2 BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Lmo1-202ENSMUST00000207178 912 ntAPPRIS ALT1 TSL 2 BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Gm10033-202ENSMUST00000211874 928 ntBASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Hsf1-204ENSMUST00000226872 2104 ntBASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Tnfrsf1bP25119 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf1bP25119 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC17.58■□□□□ 0.41
Tnfrsf1bP25119 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf1bP25119 Gm43545-201ENSMUST00000196765 2779 ntBASIC17.58■□□□□ 0.41
Tnfrsf1bP25119 Rps6ka3-201ENSMUST00000033671 7244 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Tnfrsf1bP25119 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Cnbp-201ENSMUST00000032138 2178 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Cck-203ENSMUST00000215228 783 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Tmem164-201ENSMUST00000087333 5149 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Ccdc85c-202ENSMUST00000222310 4298 ntAPPRIS P2 TSL 5 BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Slc25a4-201ENSMUST00000034049 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Ltbp4-205ENSMUST00000121175 5118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
Tnfrsf1bP25119 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 B930094E09Rik-201ENSMUST00000164667 1240 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 Fabp3-201ENSMUST00000070532 823 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 Rxra-201ENSMUST00000077257 4905 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Tnfrsf1bP25119 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Mroh6-201ENSMUST00000184858 2216 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Dact3-201ENSMUST00000108493 2989 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Gm37352-201ENSMUST00000193908 2181 ntBASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Gm26571-201ENSMUST00000181399 666 ntBASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Gm42569-201ENSMUST00000200539 472 ntBASIC17.56■□□□□ 0.4
Tnfrsf1bP25119 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms