Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Serp2-204ENSMUST00000228055 705 ntBASIC17.42■□□□□ 0.38
Hmgn1P18608 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn1P18608 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn1P18608 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Hmgn1P18608 Hbs1l-202ENSMUST00000061324 1998 ntTSL 3 BASIC17.42■□□□□ 0.38
Hmgn1P18608 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.42■□□□□ 0.38
Hmgn1P18608 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Hmgn1P18608 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC17.42■□□□□ 0.38
Hmgn1P18608 Wnk2-202ENSMUST00000049265 6738 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Hmgn1P18608 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn1P18608 Ntn5-201ENSMUST00000107742 1574 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn1P18608 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn1P18608 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn1P18608 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn1P18608 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.41■□□□□ 0.38
Hmgn1P18608 Tpm1-206ENSMUST00000113686 998 ntTSL 5 BASIC17.41■□□□□ 0.38
Hmgn1P18608 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn1P18608 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.41■□□□□ 0.38
Hmgn1P18608 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn1P18608 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Hmgn1P18608 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC17.41■□□□□ 0.38
Hmgn1P18608 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
Hmgn1P18608 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Hmgn1P18608 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn1P18608 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
Hmgn1P18608 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn1P18608 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn1P18608 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn1P18608 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
Hmgn1P18608 Grk6-206ENSMUST00000224995 2971 ntBASIC17.4■□□□□ 0.38
Hmgn1P18608 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC17.4■□□□□ 0.38
Hmgn1P18608 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn1P18608 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn1P18608 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn1P18608 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn1P18608 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Hmgn1P18608 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
Hmgn1P18608 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Hmgn1P18608 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmgn1P18608 2310061I04Rik-203ENSMUST00000148482 1193 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Hmgn1P18608 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Hmgn1P18608 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Hmgn1P18608 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC17.39■□□□□ 0.37
Hmgn1P18608 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hmgn1P18608 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
Hmgn1P18608 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.38■□□□□ 0.37
Hmgn1P18608 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Ulk2-201ENSMUST00000004920 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.38■□□□□ 0.37
Hmgn1P18608 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.38■□□□□ 0.37
Hmgn1P18608 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
Hmgn1P18608 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
Hmgn1P18608 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Hmgn1P18608 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Hmgn1P18608 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Hmgn1P18608 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC17.37■□□□□ 0.37
Hmgn1P18608 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn1P18608 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
Hmgn1P18608 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Hmgn1P18608 Gm22238-201ENSMUST00000175222 88 ntBASIC17.37■□□□□ 0.37
Hmgn1P18608 Gm5522-201ENSMUST00000189483 1242 ntBASIC17.37■□□□□ 0.37
Hmgn1P18608 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn1P18608 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn1P18608 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn1P18608 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn1P18608 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn1P18608 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.37■□□□□ 0.37
Hmgn1P18608 Gm5953-201ENSMUST00000220644 2616 ntBASIC17.36■□□□□ 0.37
Hmgn1P18608 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
Hmgn1P18608 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn1P18608 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn1P18608 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn1P18608 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn1P18608 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn1P18608 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn1P18608 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn1P18608 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Hmgn1P18608 Gm7856-201ENSMUST00000117514 1493 ntBASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 18.7 ms