Protein–RNA interactions for Protein: P13405

Rb1, Retinoblastoma-associated protein, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rb1P13405 Gm7514-201ENSMUST00000209475 934 ntBASIC19.3■□□□□ 0.68
Rb1P13405 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rb1P13405 Brsk2-205ENSMUST00000172652 2501 ntTSL 5 BASIC19.3■□□□□ 0.68
Rb1P13405 Gpr137-204ENSMUST00000099782 1742 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Rb1P13405 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rb1P13405 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Rb1P13405 2410002F23Rik-201ENSMUST00000055858 1982 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rb1P13405 Nkx2-3-201ENSMUST00000057178 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rb1P13405 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Rb1P13405 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rb1P13405 Grk6-206ENSMUST00000224995 2971 ntBASIC19.29■□□□□ 0.68
Rb1P13405 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rb1P13405 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
Rb1P13405 Kansl1-205ENSMUST00000106977 5510 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rb1P13405 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC19.29■□□□□ 0.68
Rb1P13405 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rb1P13405 AC121965.1-201ENSMUST00000221422 861 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rb1P13405 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rb1P13405 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rb1P13405 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Rb1P13405 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Rb1P13405 Espn-205ENSMUST00000084114 1645 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Rb1P13405 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rb1P13405 Sebox-202ENSMUST00000125670 1300 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rb1P13405 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
Rb1P13405 Tmem44-204ENSMUST00000140402 2405 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rb1P13405 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.28■□□□□ 0.68
Rb1P13405 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rb1P13405 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rb1P13405 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC19.28■□□□□ 0.68
Rb1P13405 Ets1-202ENSMUST00000050797 1976 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Rb1P13405 Ntf5-201ENSMUST00000058879 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Rb1P13405 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rb1P13405 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rb1P13405 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rb1P13405 Gm12441-201ENSMUST00000121806 588 ntBASIC19.27■□□□□ 0.68
Rb1P13405 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rb1P13405 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rb1P13405 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rb1P13405 Snhg20-203ENSMUST00000182811 2153 ntBASIC19.27■□□□□ 0.68
Rb1P13405 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Rb1P13405 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Rb1P13405 Klc1-204ENSMUST00000122300 2268 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Rb1P13405 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Rb1P13405 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rb1P13405 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rb1P13405 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC19.27■□□□□ 0.67
Rb1P13405 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
Rb1P13405 Vmn1r17-205ENSMUST00000228342 2230 ntAPPRIS P2 BASIC19.27■□□□□ 0.67
Rb1P13405 Paxip1-201ENSMUST00000002291 5850 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Rb1P13405 Kcnk15-202ENSMUST00000109396 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rb1P13405 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Rb1P13405 Slc39a7-203ENSMUST00000169397 2107 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Rb1P13405 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.26■□□□□ 0.67
Rb1P13405 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC19.26■□□□□ 0.67
Rb1P13405 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC19.26■□□□□ 0.67
Rb1P13405 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rb1P13405 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rb1P13405 Brms1l-201ENSMUST00000059250 2609 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rb1P13405 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Rb1P13405 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Rb1P13405 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Utp11-201ENSMUST00000030738 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Syt17-203ENSMUST00000203485 1932 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Arhgdia-202ENSMUST00000106197 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Wnt11-205ENSMUST00000167303 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Celf6-202ENSMUST00000118164 1583 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Tead4-202ENSMUST00000112157 1909 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Rb1P13405 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Rb1P13405 Sos1-201ENSMUST00000068714 8919 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Rb1P13405 Gnb2-201ENSMUST00000031726 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rb1P13405 Xk-201ENSMUST00000015486 5076 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rb1P13405 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
Rb1P13405 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rb1P13405 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rb1P13405 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC19.24■□□□□ 0.67
Rb1P13405 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rb1P13405 Ank1-202ENSMUST00000084038 8147 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rb1P13405 Bspry-201ENSMUST00000030088 1757 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rb1P13405 Serbp1-211ENSMUST00000204293 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Rb1P13405 Ppm1b-201ENSMUST00000080217 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Rb1P13405 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.23■□□□□ 0.67
Rb1P13405 Mir5133-201ENSMUST00000174955 77 ntBASIC19.23■□□□□ 0.67
Rb1P13405 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.23■□□□□ 0.67
Rb1P13405 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC19.23■□□□□ 0.67
Rb1P13405 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 Ap3s1-204ENSMUST00000225520 957 ntBASIC19.23■□□□□ 0.67
Rb1P13405 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 Klc3-204ENSMUST00000108459 1849 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Rb1P13405 Crlf3-203ENSMUST00000103233 2230 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms