Protein–RNA interactions for Protein: P0C8K7

Smim1, Small integral membrane protein 1, mousemouse

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim1P0C8K7 Fbxl6-201ENSMUST00000023219 1712 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Fam172a-202ENSMUST00000099358 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Tfdp2-202ENSMUST00000165120 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Gm37352-201ENSMUST00000193908 2181 ntBASIC13.16□□□□□ -0.3
Smim1P0C8K7 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Tuba3b-201ENSMUST00000087445 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Smad1-202ENSMUST00000066091 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Smim1P0C8K7 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Gm45412-201ENSMUST00000210217 2275 ntBASIC13.15□□□□□ -0.3
Smim1P0C8K7 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Ppia-202ENSMUST00000132846 1170 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Dynlrb1-204ENSMUST00000150602 788 ntTSL 2 BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Mroh5-201ENSMUST00000071419 2766 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Smim1P0C8K7 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Gm29442-201ENSMUST00000188725 724 ntTSL 3 BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Chpt1-201ENSMUST00000020253 3898 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Krtap5-3-202ENSMUST00000187512 1652 ntAPPRIS P2 BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Gm5828-201ENSMUST00000071842 1860 ntBASIC13.14□□□□□ -0.31
Smim1P0C8K7 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Smim1P0C8K7 Mtx1-202ENSMUST00000118964 1445 ntTSL 5 BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Pcf11-201ENSMUST00000119954 5995 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Gm43213-201ENSMUST00000151866 1790 ntBASIC13.13□□□□□ -0.31
Smim1P0C8K7 Rtca-201ENSMUST00000000348 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC13.13□□□□□ -0.31
Smim1P0C8K7 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC13.13□□□□□ -0.31
Smim1P0C8K7 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Rcl1-201ENSMUST00000064393 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Smim1P0C8K7 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Hdhd2-206ENSMUST00000145634 1585 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Cnn3-201ENSMUST00000029773 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Lemd3-201ENSMUST00000119093 4370 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Nkiras2-203ENSMUST00000107376 1727 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Zfand2b-201ENSMUST00000027394 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Smim1P0C8K7 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Smim1P0C8K7 Fam104a-201ENSMUST00000120194 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms