Protein–RNA interactions for Protein: P09631

Hoxa9, Homeobox protein Hox-A9, mousemouse

Predictions only

Length 271 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa9P09631 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Hoxa9P09631 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.19■□□□□ 0.66
Hoxa9P09631 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Hoxa9P09631 Hpdl-201ENSMUST00000055436 1804 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hoxa9P09631 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC19.19■□□□□ 0.66
Hoxa9P09631 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 Gm10065-201ENSMUST00000076238 345 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Hoxa9P09631 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 Dvl3-203ENSMUST00000171572 2493 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC19.19■□□□□ 0.66
Hoxa9P09631 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Hoxa9P09631 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.19■□□□□ 0.66
Hoxa9P09631 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa9P09631 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hoxa9P09631 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hoxa9P09631 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hoxa9P09631 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa9P09631 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa9P09631 Gm12527-201ENSMUST00000117967 564 ntBASIC19.18■□□□□ 0.66
Hoxa9P09631 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxa9P09631 Gm45121-201ENSMUST00000205396 1153 ntTSL 5 BASIC19.18■□□□□ 0.66
Hoxa9P09631 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Hoxa9P09631 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa9P09631 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Hoxa9P09631 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Hoxa9P09631 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC19.18■□□□□ 0.66
Hoxa9P09631 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Hoxa9P09631 Ccdc112-201ENSMUST00000072835 2801 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Hoxa9P09631 Ptpmt1-203ENSMUST00000125001 3183 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa9P09631 Pbx1-206ENSMUST00000176790 1828 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa9P09631 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Hoxa9P09631 Gm7860-201ENSMUST00000121190 879 ntBASIC19.17■□□□□ 0.66
Hoxa9P09631 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa9P09631 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa9P09631 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa9P09631 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Hoxa9P09631 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.16■□□□□ 0.66
Hoxa9P09631 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Hoxa9P09631 Gm8520-201ENSMUST00000186517 868 ntBASIC19.16■□□□□ 0.66
Hoxa9P09631 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.16■□□□□ 0.66
Hoxa9P09631 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
Hoxa9P09631 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa9P09631 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.16■□□□□ 0.66
Hoxa9P09631 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.16■□□□□ 0.66
Hoxa9P09631 Lrp3-202ENSMUST00000122409 4147 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa9P09631 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa9P09631 Gm43859-201ENSMUST00000200075 1412 ntBASIC19.16■□□□□ 0.66
Hoxa9P09631 Krt76-201ENSMUST00000100179 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Hoxa9P09631 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.15■□□□□ 0.66
Hoxa9P09631 Vegfa-207ENSMUST00000142351 1973 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa9P09631 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hoxa9P09631 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hoxa9P09631 Hist1h4c-201ENSMUST00000102967 820 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
Hoxa9P09631 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa9P09631 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa9P09631 Tmem54-201ENSMUST00000030575 1064 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa9P09631 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
Hoxa9P09631 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa9P09631 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa9P09631 Lacc1-201ENSMUST00000062789 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Hoxa9P09631 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Hoxa9P09631 Fbxo27-203ENSMUST00000108281 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa9P09631 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa9P09631 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
Hoxa9P09631 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa9P09631 Gm27032-201ENSMUST00000183124 1116 ntBASIC19.14■□□□□ 0.65
Hoxa9P09631 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC19.14■□□□□ 0.65
Hoxa9P09631 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa9P09631 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa9P09631 En2-201ENSMUST00000036177 3539 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa9P09631 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa9P09631 Whamm-201ENSMUST00000165460 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Hoxa9P09631 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.13■□□□□ 0.65
Hoxa9P09631 Gm22240-201ENSMUST00000175225 82 ntBASIC19.13■□□□□ 0.65
Hoxa9P09631 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa9P09631 Atoh8-201ENSMUST00000042646 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa9P09631 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa9P09631 Inhbb-201ENSMUST00000038765 4255 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Hoxa9P09631 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxa9P09631 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxa9P09631 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Hoxa9P09631 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
Hoxa9P09631 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxa9P09631 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxa9P09631 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxa9P09631 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxa9P09631 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxa9P09631 Gm20049-201ENSMUST00000219950 730 ntBASIC19.11■□□□□ 0.65
Hoxa9P09631 AC122769.4-201ENSMUST00000228166 901 ntBASIC19.11■□□□□ 0.65
Hoxa9P09631 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
Hoxa9P09631 Wipi2-202ENSMUST00000110778 1959 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Hoxa9P09631 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Hoxa9P09631 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms