Protein–RNA interactions for Protein: P04946

Ig kappa chain V-V region NQ5-89.4, mousemouse

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04946 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
P04946 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04946 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04946 Glrx5-201ENSMUST00000021522 2925 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04946 Cadps-202ENSMUST00000112657 5455 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
P04946 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC16.4■□□□□ 0.22
P04946 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04946 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04946 AC131586.2-201ENSMUST00000228370 1512 ntBASIC16.4■□□□□ 0.22
P04946 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
P04946 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
P04946 Paip1-201ENSMUST00000026520 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.22
P04946 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
P04946 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
P04946 Spcs1-207ENSMUST00000228767 1008 ntBASIC16.39■□□□□ 0.21
P04946 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 Cav2-201ENSMUST00000000058 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
P04946 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04946 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04946 Gm13148-201ENSMUST00000118892 745 ntBASIC16.38■□□□□ 0.21
P04946 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04946 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
P04946 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04946 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
P04946 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC16.38■□□□□ 0.21
P04946 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
P04946 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
P04946 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC16.37■□□□□ 0.21
P04946 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC16.37■□□□□ 0.21
P04946 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
P04946 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
P04946 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04946 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04946 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
P04946 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04946 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC16.36■□□□□ 0.21
P04946 Gm3807-201ENSMUST00000193520 1168 ntBASIC16.36■□□□□ 0.21
P04946 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
P04946 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
P04946 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
P04946 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.35■□□□□ 0.21
P04946 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 Gm6211-202ENSMUST00000167849 925 ntBASIC16.35■□□□□ 0.21
P04946 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC16.35■□□□□ 0.21
P04946 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC16.35■□□□□ 0.21
P04946 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC16.35■□□□□ 0.21
P04946 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
P04946 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC16.35■□□□□ 0.21
P04946 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04946 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
P04946 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC16.34■□□□□ 0.21
P04946 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04946 Gm26971-201ENSMUST00000182423 1072 ntBASIC16.34■□□□□ 0.21
P04946 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04946 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.34■□□□□ 0.21
P04946 Lbx2-201ENSMUST00000041265 817 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04946 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04946 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04946 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC16.34■□□□□ 0.21
P04946 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
P04946 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
P04946 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
P04946 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
P04946 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
P04946 Gm37352-201ENSMUST00000193908 2181 ntBASIC16.33■□□□□ 0.2
P04946 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms