Protein–RNA interactions for Protein: P04756

Chrna1, Acetylcholine receptor subunit alpha, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna1P04756 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna1P04756 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna1P04756 Ccdc34-201ENSMUST00000028580 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Chrna1P04756 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna1P04756 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.56■□□□□ 0.88
Chrna1P04756 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.56■□□□□ 0.88
Chrna1P04756 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna1P04756 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna1P04756 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.56■□□□□ 0.88
Chrna1P04756 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
Chrna1P04756 Map4k3-201ENSMUST00000025089 4225 ntAPPRIS P2 TSL 5 BASIC20.56■□□□□ 0.88
Chrna1P04756 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.56■□□□□ 0.88
Chrna1P04756 Caml-201ENSMUST00000021963 1382 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Chrna1P04756 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna1P04756 Rbm38-204ENSMUST00000173393 2071 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
Chrna1P04756 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna1P04756 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna1P04756 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC20.55■□□□□ 0.88
Chrna1P04756 Ttc32-201ENSMUST00000085741 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna1P04756 Cbfb-204ENSMUST00000109395 2709 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna1P04756 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna1P04756 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna1P04756 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Chrna1P04756 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Slc26a10-201ENSMUST00000095270 2215 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Chrna1P04756 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
Chrna1P04756 Hyal2-207ENSMUST00000195752 2062 ntAPPRIS P2 TSL 5 BASIC20.54■□□□□ 0.88
Chrna1P04756 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
Chrna1P04756 Rpl26-202ENSMUST00000101014 657 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
Chrna1P04756 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Gm5408-201ENSMUST00000197998 747 ntBASIC20.54■□□□□ 0.88
Chrna1P04756 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
Chrna1P04756 Gm45890-201ENSMUST00000212043 1026 ntTSL 5 BASIC20.54■□□□□ 0.88
Chrna1P04756 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Tesmin-204ENSMUST00000151341 2013 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC20.54■□□□□ 0.88
Chrna1P04756 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
Chrna1P04756 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.54■□□□□ 0.88
Chrna1P04756 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Chrna1P04756 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.53■□□□□ 0.88
Chrna1P04756 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
Chrna1P04756 Sept5-201ENSMUST00000096987 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Chrna1P04756 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
Chrna1P04756 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
Chrna1P04756 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
Chrna1P04756 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna1P04756 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna1P04756 Mrps16-201ENSMUST00000061444 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna1P04756 Ahsa2-201ENSMUST00000020529 3023 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna1P04756 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna1P04756 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna1P04756 Gm12527-201ENSMUST00000117967 564 ntBASIC20.52■□□□□ 0.88
Chrna1P04756 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC20.52■□□□□ 0.88
Chrna1P04756 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC20.52■□□□□ 0.88
Chrna1P04756 Gm10653-202ENSMUST00000139570 835 ntBASIC20.52■□□□□ 0.88
Chrna1P04756 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC20.52■□□□□ 0.88
Chrna1P04756 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.52■□□□□ 0.88
Chrna1P04756 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna1P04756 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC20.52■□□□□ 0.88
Chrna1P04756 Vgll2-201ENSMUST00000058347 966 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Chrna1P04756 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chrna1P04756 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC20.52■□□□□ 0.87
Chrna1P04756 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Chrna1P04756 Cracr2b-201ENSMUST00000053670 1698 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna1P04756 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna1P04756 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna1P04756 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna1P04756 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Chrna1P04756 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC20.51■□□□□ 0.87
Chrna1P04756 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna1P04756 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna1P04756 Sigmar1-201ENSMUST00000059354 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna1P04756 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna1P04756 Siah1b-201ENSMUST00000037928 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Chrna1P04756 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Chrna1P04756 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC20.5■□□□□ 0.87
Chrna1P04756 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna1P04756 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna1P04756 Pitx3-201ENSMUST00000026259 1380 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Chrna1P04756 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms