Protein–RNA interactions for Protein: P04224

H-2 class II histocompatibility antigen, E-K alpha chain, mousemouse

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04224 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04224 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04224 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
P04224 Ssc4d-204ENSMUST00000111153 2745 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
P04224 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
P04224 Msx1-201ENSMUST00000063116 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Becn1-217ENSMUST00000172233 1493 ntTSL 5 BASIC16.68■□□□□ 0.26
P04224 2210011C24Rik-204ENSMUST00000190457 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.68■□□□□ 0.26
P04224 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.68■□□□□ 0.26
P04224 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Clta-206ENSMUST00000170241 1079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Slc25a16-201ENSMUST00000044977 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Pgam5-201ENSMUST00000059229 2044 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Gm5540-201ENSMUST00000131852 1848 ntBASIC16.68■□□□□ 0.26
P04224 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
P04224 Irx3-201ENSMUST00000093312 2610 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Fiz1-204ENSMUST00000207030 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Stk3-202ENSMUST00000067033 2471 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 A730035I17Rik-205ENSMUST00000205851 684 ntBASIC16.67■□□□□ 0.26
P04224 AC166356.1-201ENSMUST00000228236 1426 ntBASIC16.67■□□□□ 0.26
P04224 Kcnn4-201ENSMUST00000171904 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC16.67■□□□□ 0.26
P04224 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
P04224 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
P04224 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
P04224 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
P04224 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04224 Gm9748-202ENSMUST00000194881 783 ntTSL 2 BASIC16.66■□□□□ 0.26
P04224 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC16.66■□□□□ 0.26
P04224 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
P04224 B3gnt9-201ENSMUST00000093217 2325 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
P04224 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04224 Acvrl1-206ENSMUST00000121718 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04224 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
P04224 Rbm38-201ENSMUST00000029014 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04224 Zfp653-201ENSMUST00000043922 2108 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
P04224 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04224 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.65■□□□□ 0.26
P04224 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04224 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04224 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04224 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04224 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
P04224 Rem2-201ENSMUST00000164697 1194 ntTSL 5 BASIC16.65■□□□□ 0.26
P04224 Aatf-201ENSMUST00000018841 1822 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04224 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
P04224 Gm35558-201ENSMUST00000222675 2219 ntBASIC16.65■□□□□ 0.26
P04224 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
P04224 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
P04224 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04224 Nsmf-206ENSMUST00000114388 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04224 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04224 Nfatc3-201ENSMUST00000109308 5984 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
P04224 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
P04224 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
P04224 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC16.64■□□□□ 0.25
P04224 Cpsf4-202ENSMUST00000160422 1756 ntAPPRIS ALT1 TSL 5 BASIC16.64■□□□□ 0.25
P04224 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04224 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04224 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04224 Zfp346-202ENSMUST00000159147 1146 ntTSL 5 BASIC16.63■□□□□ 0.25
P04224 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04224 Dedd2-201ENSMUST00000058702 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04224 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
P04224 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04224 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.25
P04224 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
P04224 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 4930426I24Rik-202ENSMUST00000217797 1232 ntBASIC16.62■□□□□ 0.25
P04224 Ttc36-201ENSMUST00000044694 888 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
P04224 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Armc10-202ENSMUST00000095495 2700 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
P04224 Gas1-201ENSMUST00000065086 2961 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
P04224 Capn1-202ENSMUST00000164843 3048 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
P04224 Mpv17l2-201ENSMUST00000038626 980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms