Protein–RNA interactions for Protein: P00416

mt-Co3, Cytochrome c oxidase subunit 3, mousemouse

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
mt-Co3P00416 Gm20431-201ENSMUST00000125544 2367 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
mt-Co3P00416 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
mt-Co3P00416 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
mt-Co3P00416 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
mt-Co3P00416 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
mt-Co3P00416 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
mt-Co3P00416 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
mt-Co3P00416 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC19.56■□□□□ 0.72
mt-Co3P00416 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
mt-Co3P00416 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
mt-Co3P00416 Sh3bp1-204ENSMUST00000109698 1923 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
mt-Co3P00416 Raph1-201ENSMUST00000027168 2241 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
mt-Co3P00416 Lzts2-202ENSMUST00000178087 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
mt-Co3P00416 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC19.55■□□□□ 0.72
mt-Co3P00416 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC19.55■□□□□ 0.72
mt-Co3P00416 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.55■□□□□ 0.72
mt-Co3P00416 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
mt-Co3P00416 AC163280.1-201ENSMUST00000228194 1100 ntBASIC19.55■□□□□ 0.72
mt-Co3P00416 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
mt-Co3P00416 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
mt-Co3P00416 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
mt-Co3P00416 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
mt-Co3P00416 Terf2-204ENSMUST00000133925 2666 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
mt-Co3P00416 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
mt-Co3P00416 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
mt-Co3P00416 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
mt-Co3P00416 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
mt-Co3P00416 Sost-201ENSMUST00000001534 2066 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
mt-Co3P00416 Ldb1-202ENSMUST00000056931 2295 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
mt-Co3P00416 Polr1d-202ENSMUST00000110557 1137 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
mt-Co3P00416 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.53■□□□□ 0.72
mt-Co3P00416 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC19.53■□□□□ 0.72
mt-Co3P00416 Dcxr-201ENSMUST00000026144 892 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
mt-Co3P00416 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
mt-Co3P00416 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC19.53■□□□□ 0.72
mt-Co3P00416 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC19.53■□□□□ 0.72
mt-Co3P00416 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.53■□□□□ 0.72
mt-Co3P00416 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC19.53■□□□□ 0.72
mt-Co3P00416 Hes1-201ENSMUST00000023171 1468 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
mt-Co3P00416 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
mt-Co3P00416 Lrrc1-205ENSMUST00000183873 3121 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
mt-Co3P00416 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
mt-Co3P00416 Gab2-202ENSMUST00000206791 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
mt-Co3P00416 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
mt-Co3P00416 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.52■□□□□ 0.72
mt-Co3P00416 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
mt-Co3P00416 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
mt-Co3P00416 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.52■□□□□ 0.71
mt-Co3P00416 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
mt-Co3P00416 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
mt-Co3P00416 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
mt-Co3P00416 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
mt-Co3P00416 Tlk2-202ENSMUST00000092537 2743 ntTSL 1 (best) BASIC19.52■□□□□ 0.71
mt-Co3P00416 Sox17-208ENSMUST00000195555 1977 ntTSL 5 BASIC19.52■□□□□ 0.71
mt-Co3P00416 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Rhou-201ENSMUST00000045487 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Mapk11-201ENSMUST00000088823 2440 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC19.51■□□□□ 0.71
mt-Co3P00416 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.51■□□□□ 0.71
mt-Co3P00416 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 2200002D01Rik-201ENSMUST00000032808 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Gorasp2-201ENSMUST00000028509 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Ubxn2a-203ENSMUST00000142867 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Uckl1os-201ENSMUST00000122831 2018 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
mt-Co3P00416 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
mt-Co3P00416 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
mt-Co3P00416 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
mt-Co3P00416 L3mbtl4-201ENSMUST00000093007 2445 ntAPPRIS P1 TSL 5 BASIC19.5■□□□□ 0.71
mt-Co3P00416 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.5■□□□□ 0.71
mt-Co3P00416 2210408F21Rik-208ENSMUST00000144612 450 ntTSL 3 BASIC19.5■□□□□ 0.71
mt-Co3P00416 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
mt-Co3P00416 Gm7367-201ENSMUST00000057611 492 ntBASIC19.5■□□□□ 0.71
mt-Co3P00416 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC19.5■□□□□ 0.71
mt-Co3P00416 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
mt-Co3P00416 Olig3-201ENSMUST00000053225 2072 ntAPPRIS P1 BASIC19.5■□□□□ 0.71
mt-Co3P00416 5730488B01Rik-201ENSMUST00000192889 2311 ntBASIC19.5■□□□□ 0.71
mt-Co3P00416 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC19.49■□□□□ 0.71
mt-Co3P00416 1700105P06Rik-201ENSMUST00000186160 1772 ntBASIC19.49■□□□□ 0.71
mt-Co3P00416 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC19.49■□□□□ 0.71
mt-Co3P00416 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
mt-Co3P00416 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
mt-Co3P00416 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC19.48■□□□□ 0.71
mt-Co3P00416 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
mt-Co3P00416 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
mt-Co3P00416 Slc18a3-201ENSMUST00000191501 2413 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
mt-Co3P00416 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
mt-Co3P00416 Map4k3-202ENSMUST00000112389 4231 ntAPPRIS ALT1 TSL 5 BASIC19.48■□□□□ 0.71
mt-Co3P00416 Hck-203ENSMUST00000189688 2090 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
mt-Co3P00416 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
mt-Co3P00416 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
mt-Co3P00416 Carm1-203ENSMUST00000115395 3152 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
mt-Co3P00416 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
mt-Co3P00416 Snrnp70-201ENSMUST00000074575 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
mt-Co3P00416 Retreg2-208ENSMUST00000190240 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
mt-Co3P00416 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
mt-Co3P00416 Cdc16-201ENSMUST00000043962 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
mt-Co3P00416 P2rx2-203ENSMUST00000195985 2096 ntAPPRIS P4 TSL 1 (best) BASIC19.47■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms