Protein–RNA interactions for Protein: O89090

Sp1, Transcription factor Sp1, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp1O89090 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp1O89090 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp1O89090 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Sp1O89090 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Sp1O89090 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.34■□□□□ 0.69
Sp1O89090 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC19.34■□□□□ 0.69
Sp1O89090 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Sp1O89090 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Sp1O89090 Fdx1l-201ENSMUST00000010348 812 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sp1O89090 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sp1O89090 Mir5133-201ENSMUST00000174955 77 ntBASIC19.33■□□□□ 0.68
Sp1O89090 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Sp1O89090 Arid3c-204ENSMUST00000171251 1751 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.68
Sp1O89090 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Sp1O89090 Idnk-202ENSMUST00000109868 1462 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Sp1O89090 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC19.33■□□□□ 0.68
Sp1O89090 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC19.33■□□□□ 0.68
Sp1O89090 Zfp213-201ENSMUST00000095606 2672 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp1O89090 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp1O89090 Cbfb-201ENSMUST00000052209 2883 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp1O89090 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp1O89090 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp1O89090 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp1O89090 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp1O89090 CT025689.6-201ENSMUST00000224991 1104 ntBASIC19.32■□□□□ 0.68
Sp1O89090 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp1O89090 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC19.32■□□□□ 0.68
Sp1O89090 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC19.32■□□□□ 0.68
Sp1O89090 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sp1O89090 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sp1O89090 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp1O89090 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp1O89090 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp1O89090 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp1O89090 Maz-203ENSMUST00000205568 2650 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
Sp1O89090 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp1O89090 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp1O89090 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp1O89090 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Sp1O89090 AC131586.2-201ENSMUST00000228370 1512 ntBASIC19.3■□□□□ 0.68
Sp1O89090 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 Ppp2r5a-201ENSMUST00000067976 3088 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC19.3■□□□□ 0.68
Sp1O89090 Gm26971-201ENSMUST00000182423 1072 ntBASIC19.3■□□□□ 0.68
Sp1O89090 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
Sp1O89090 Grsf1-201ENSMUST00000078945 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Sp1O89090 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 Bag5-201ENSMUST00000054636 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Sp1O89090 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp1O89090 Ndel1-201ENSMUST00000018880 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp1O89090 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sp1O89090 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
Sp1O89090 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp1O89090 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
Sp1O89090 Gm13148-201ENSMUST00000118892 745 ntBASIC19.29■□□□□ 0.68
Sp1O89090 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC19.29■□□□□ 0.68
Sp1O89090 Fxyd1-215ENSMUST00000206474 572 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp1O89090 Tmem42-202ENSMUST00000213514 631 ntTSL 3 BASIC19.29■□□□□ 0.68
Sp1O89090 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp1O89090 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Sp1O89090 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp1O89090 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Sp1O89090 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sp1O89090 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Sp1O89090 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sp1O89090 Gm7290-201ENSMUST00000104990 617 ntBASIC19.28■□□□□ 0.68
Sp1O89090 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.28■□□□□ 0.68
Sp1O89090 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
Sp1O89090 Gm12918-201ENSMUST00000120234 636 ntBASIC19.28■□□□□ 0.68
Sp1O89090 Gm15710-201ENSMUST00000121821 636 ntBASIC19.28■□□□□ 0.68
Sp1O89090 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC19.28■□□□□ 0.68
Sp1O89090 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sp1O89090 Gm5075-201ENSMUST00000196916 622 ntBASIC19.28■□□□□ 0.68
Sp1O89090 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC19.28■□□□□ 0.68
Sp1O89090 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC19.28■□□□□ 0.68
Sp1O89090 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sp1O89090 Lgr4-202ENSMUST00000111037 4988 ntTSL 5 BASIC19.28■□□□□ 0.68
Sp1O89090 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Sp1O89090 Cbx4-201ENSMUST00000026665 5179 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sp1O89090 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Sp1O89090 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sp1O89090 Stx2-202ENSMUST00000100680 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp1O89090 Gpc3-202ENSMUST00000114857 1880 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Sp1O89090 Ppp6r2-202ENSMUST00000226221 2559 ntBASIC19.27■□□□□ 0.68
Sp1O89090 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp1O89090 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC19.27■□□□□ 0.68
Sp1O89090 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.27■□□□□ 0.68
Sp1O89090 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Sp1O89090 Gm5540-201ENSMUST00000131852 1848 ntBASIC19.27■□□□□ 0.68
Sp1O89090 Ascl4-202ENSMUST00000170396 2016 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
Sp1O89090 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Sp1O89090 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Sp1O89090 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Sp1O89090 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 12 ms