Protein–RNA interactions for Protein: O88627

Slc28a2, Sodium/nucleoside cotransporter 2, mousemouse

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a2O88627 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Slc28a2O88627 Stoml2-201ENSMUST00000030169 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Shkbp1-201ENSMUST00000003857 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC16.88■□□□□ 0.29
Slc28a2O88627 Gm26682-201ENSMUST00000180850 1729 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Arpc5-202ENSMUST00000097536 1737 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Lamp1-201ENSMUST00000033824 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Zfp467-202ENSMUST00000114556 2287 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Slc28a2O88627 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Slc28a2O88627 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Setd3-201ENSMUST00000071095 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Golga5-202ENSMUST00000179218 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Jagn1-201ENSMUST00000101070 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Pfdn4-204ENSMUST00000109148 736 ntTSL 3 BASIC16.87■□□□□ 0.29
Slc28a2O88627 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC16.87■□□□□ 0.29
Slc28a2O88627 AC140930.3-201ENSMUST00000222935 274 ntBASIC16.87■□□□□ 0.29
Slc28a2O88627 Cdkn3-203ENSMUST00000227149 1952 ntBASIC16.87■□□□□ 0.29
Slc28a2O88627 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Mrpl3-205ENSMUST00000149243 2309 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Slc28a2O88627 Gm6085-201ENSMUST00000182774 1470 ntBASIC16.86■□□□□ 0.29
Slc28a2O88627 Wdsub1-202ENSMUST00000102751 1526 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Slc28a2O88627 Cpne2-201ENSMUST00000048653 2342 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc28a2O88627 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc28a2O88627 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.86■□□□□ 0.29
Slc28a2O88627 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc28a2O88627 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
Slc28a2O88627 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Slc28a2O88627 Mrpl16-201ENSMUST00000167199 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc28a2O88627 Tpst2-202ENSMUST00000071455 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc28a2O88627 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc28a2O88627 Gm43034-201ENSMUST00000198678 1364 ntBASIC16.86■□□□□ 0.29
Slc28a2O88627 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Slc28a2O88627 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC16.86■□□□□ 0.29
Slc28a2O88627 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc28a2O88627 Sirt1-202ENSMUST00000105442 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc28a2O88627 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc28a2O88627 Col9a3-203ENSMUST00000132527 3046 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
Slc28a2O88627 Gm10941-201ENSMUST00000105408 708 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slc28a2O88627 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
Slc28a2O88627 Hyi-205ENSMUST00000194248 936 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slc28a2O88627 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Slc28a2O88627 Gm5576-201ENSMUST00000075809 1236 ntBASIC16.85■□□□□ 0.29
Slc28a2O88627 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC16.85■□□□□ 0.29
Slc28a2O88627 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc28a2O88627 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc28a2O88627 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Slc28a2O88627 Tuba1b-201ENSMUST00000077577 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Slc28a2O88627 Adssl1-202ENSMUST00000180015 1819 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Cdkn1c-201ENSMUST00000037287 1901 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Gm6802-201ENSMUST00000167843 1983 ntBASIC16.84■□□□□ 0.29
Slc28a2O88627 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Slc28a2O88627 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Slc28a2O88627 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Ubxn1-202ENSMUST00000166407 1032 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Stx2-201ENSMUST00000031378 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Gm4969-202ENSMUST00000141380 1892 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
Slc28a2O88627 Tob1-201ENSMUST00000041589 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Slc28a2O88627 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC16.84■□□□□ 0.29
Slc28a2O88627 Mex3b-201ENSMUST00000082237 3355 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
Slc28a2O88627 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 Bcl11b-203ENSMUST00000109891 2888 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 D630036H23Rik-201ENSMUST00000171007 940 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
Slc28a2O88627 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
Slc28a2O88627 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 Rrad-201ENSMUST00000034351 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.83■□□□□ 0.28
Slc28a2O88627 Chmp7-201ENSMUST00000036381 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Slc28a2O88627 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc28a2O88627 Gm10209-201ENSMUST00000203397 1607 ntBASIC16.82■□□□□ 0.28
Slc28a2O88627 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc28a2O88627 1700030C10Rik-201ENSMUST00000110971 1471 ntBASIC16.82■□□□□ 0.28
Slc28a2O88627 Coq10a-201ENSMUST00000043211 1421 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
Slc28a2O88627 Atf6b-201ENSMUST00000015605 2566 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc28a2O88627 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Slc28a2O88627 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Slc28a2O88627 Spint1-202ENSMUST00000110816 1913 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Slc28a2O88627 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Slc28a2O88627 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
Slc28a2O88627 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.81■□□□□ 0.28
Slc28a2O88627 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms