Protein–RNA interactions for Protein: O88552

Cldn2, Claudin-2, mousemouse

Predictions only

Length 230 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn2O88552 Gm37856-201ENSMUST00000191634 999 ntBASIC19.48■□□□□ 0.71
Cldn2O88552 2900042K21Rik-201ENSMUST00000194444 653 ntBASIC19.48■□□□□ 0.71
Cldn2O88552 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC19.48■□□□□ 0.71
Cldn2O88552 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn2O88552 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn2O88552 D830050J10Rik-202ENSMUST00000203858 1813 ntBASIC19.48■□□□□ 0.71
Cldn2O88552 Selenoo-201ENSMUST00000082439 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Cldn2O88552 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn2O88552 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn2O88552 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC19.47■□□□□ 0.71
Cldn2O88552 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
Cldn2O88552 AC135637.1-201ENSMUST00000227750 365 ntBASIC19.47■□□□□ 0.71
Cldn2O88552 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Cldn2O88552 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
Cldn2O88552 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn2O88552 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn2O88552 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn2O88552 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
Cldn2O88552 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn2O88552 Brsk1-201ENSMUST00000048248 2996 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Cldn2O88552 Vgll2-202ENSMUST00000163017 1650 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn2O88552 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cldn2O88552 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn2O88552 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.46■□□□□ 0.71
Cldn2O88552 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn2O88552 Tmem51-201ENSMUST00000036572 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn2O88552 Mgat5b-201ENSMUST00000103027 4258 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cldn2O88552 Eloc-203ENSMUST00000185771 742 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Cldn2O88552 Gm26524-201ENSMUST00000192339 390 ntBASIC19.46■□□□□ 0.71
Cldn2O88552 Gm44965-201ENSMUST00000204121 360 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Cldn2O88552 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
Cldn2O88552 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn2O88552 Aifm2-204ENSMUST00000105455 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn2O88552 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Cldn2O88552 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 St3gal4-201ENSMUST00000034537 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC19.45■□□□□ 0.7
Cldn2O88552 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC19.45■□□□□ 0.7
Cldn2O88552 Kcnn2-203ENSMUST00000169783 1625 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 Gm13168-201ENSMUST00000121771 632 ntBASIC19.45■□□□□ 0.7
Cldn2O88552 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC19.45■□□□□ 0.7
Cldn2O88552 Gm8520-201ENSMUST00000186517 868 ntBASIC19.45■□□□□ 0.7
Cldn2O88552 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Cldn2O88552 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Mknk2-205ENSMUST00000200082 3439 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 Pus1-201ENSMUST00000031481 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.44■□□□□ 0.7
Cldn2O88552 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn2O88552 Mrps10-203ENSMUST00000119945 1018 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn2O88552 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.43■□□□□ 0.7
Cldn2O88552 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cldn2O88552 1110032F04Rik-201ENSMUST00000054551 2578 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
Cldn2O88552 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
Cldn2O88552 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC19.43■□□□□ 0.7
Cldn2O88552 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Cldn2O88552 Gm38160-201ENSMUST00000193090 2499 ntBASIC19.43■□□□□ 0.7
Cldn2O88552 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Cldn2O88552 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn2O88552 Rab3c-203ENSMUST00000224180 967 ntBASIC19.42■□□□□ 0.7
Cldn2O88552 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn2O88552 Gm13509-201ENSMUST00000119733 1308 ntBASIC19.42■□□□□ 0.7
Cldn2O88552 Flot2-203ENSMUST00000100784 2699 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn2O88552 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn2O88552 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn2O88552 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn2O88552 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Cldn2O88552 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 Ssbp3-201ENSMUST00000030367 3195 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Cldn2O88552 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
Cldn2O88552 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 Snx5-201ENSMUST00000028909 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Cldn2O88552 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn2O88552 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn2O88552 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn2O88552 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn2O88552 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn2O88552 1110004F10Rik-202ENSMUST00000106607 1153 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
Cldn2O88552 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC19.4■□□□□ 0.7
Cldn2O88552 Trmt13-210ENSMUST00000198454 880 ntBASIC19.4■□□□□ 0.7
Cldn2O88552 Gm10252-201ENSMUST00000209541 832 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms