Protein–RNA interactions for Protein: O88413

Tulp3, Tubby-related protein 3, mousemouse

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tulp3O88413 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tulp3O88413 Wnt8a-201ENSMUST00000012426 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Tulp3O88413 Itgb4-210ENSMUST00000169928 6160 ntAPPRIS P2 TSL 5 BASIC17.77■□□□□ 0.43
Tulp3O88413 Ccdc6-203ENSMUST00000147545 5511 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tulp3O88413 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tulp3O88413 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tulp3O88413 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tulp3O88413 Gfi1-201ENSMUST00000031205 2860 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tulp3O88413 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tulp3O88413 Endod1-203ENSMUST00000214236 419 ntAPPRIS ALT2 TSL 3 BASIC17.76■□□□□ 0.43
Tulp3O88413 Mtmr14-201ENSMUST00000113146 2676 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tulp3O88413 Dgke-202ENSMUST00000107894 8347 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Tulp3O88413 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tulp3O88413 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Tulp3O88413 Gm11762-201ENSMUST00000135630 1705 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Tulp3O88413 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tulp3O88413 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC17.75■□□□□ 0.43
Tulp3O88413 Zfp579-206ENSMUST00000162731 2489 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Tulp3O88413 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tulp3O88413 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tulp3O88413 Smap1-201ENSMUST00000027339 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tulp3O88413 Pdp1-206ENSMUST00000108302 2525 ntTSL 3 BASIC17.75■□□□□ 0.43
Tulp3O88413 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
Tulp3O88413 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tulp3O88413 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC17.75■□□□□ 0.43
Tulp3O88413 Hsdl1-201ENSMUST00000036049 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tulp3O88413 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tulp3O88413 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Tulp3O88413 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Tulp3O88413 Gm5540-201ENSMUST00000131852 1848 ntBASIC17.75■□□□□ 0.43
Tulp3O88413 Mfsd14a-201ENSMUST00000029570 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tulp3O88413 Gm38342-201ENSMUST00000195710 2980 ntBASIC17.74■□□□□ 0.43
Tulp3O88413 Cacul1-201ENSMUST00000081790 5790 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tulp3O88413 Irgq-201ENSMUST00000049020 6083 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Tulp3O88413 Adgrl1-207ENSMUST00000141158 8181 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tulp3O88413 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Tulp3O88413 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.74■□□□□ 0.43
Tulp3O88413 Gm32699-201ENSMUST00000221728 1988 ntBASIC17.73■□□□□ 0.43
Tulp3O88413 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tulp3O88413 Tlcd1-201ENSMUST00000092880 2700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tulp3O88413 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Tulp3O88413 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Tulp3O88413 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tulp3O88413 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tulp3O88413 Hist2h2ab-201ENSMUST00000073115 444 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Tulp3O88413 Gm9885-202ENSMUST00000186234 2209 ntBASIC17.73■□□□□ 0.43
Tulp3O88413 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tulp3O88413 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tulp3O88413 Ppp1r13b-201ENSMUST00000054815 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Tulp3O88413 Usp36-202ENSMUST00000106296 5655 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Tulp3O88413 Zfp644-205ENSMUST00000112698 5689 ntAPPRIS P2 TSL 5 BASIC17.72■□□□□ 0.43
Tulp3O88413 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Tulp3O88413 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC17.72■□□□□ 0.43
Tulp3O88413 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tulp3O88413 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Tulp3O88413 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tulp3O88413 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tulp3O88413 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tulp3O88413 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tulp3O88413 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tulp3O88413 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.72■□□□□ 0.43
Tulp3O88413 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Tulp3O88413 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tulp3O88413 Cdk19-201ENSMUST00000044672 5807 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tulp3O88413 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tulp3O88413 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tulp3O88413 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Tulp3O88413 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.43
Tulp3O88413 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Tulp3O88413 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Tulp3O88413 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Tulp3O88413 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tulp3O88413 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Tulp3O88413 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.7■□□□□ 0.42
Tulp3O88413 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tulp3O88413 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tulp3O88413 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tulp3O88413 Gm43182-201ENSMUST00000199476 2528 ntBASIC17.7■□□□□ 0.42
Tulp3O88413 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC17.7■□□□□ 0.42
Tulp3O88413 Map4k4-202ENSMUST00000168431 5632 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tulp3O88413 Larp1-201ENSMUST00000071487 6614 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Tulp3O88413 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tulp3O88413 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tulp3O88413 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Tulp3O88413 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.69■□□□□ 0.42
Tulp3O88413 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Tulp3O88413 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tulp3O88413 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC17.69■□□□□ 0.42
Tulp3O88413 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
Tulp3O88413 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 A930032L01Rik-201ENSMUST00000195845 957 ntBASIC17.69■□□□□ 0.42
Tulp3O88413 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Tulp3O88413 Srsf1-201ENSMUST00000079866 2948 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 17.4 ms