Protein–RNA interactions for Protein: O88307

Sorl1, Sortilin-related receptor, mousemouse

Known RBP Predictions only

Length 2,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sorl1O88307 Smarcad1-201ENSMUST00000031984 5168 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Sorl1O88307 Gm27011-201ENSMUST00000182352 972 ntBASIC14.74□□□□□ -0.05
Sorl1O88307 Gm38205-201ENSMUST00000192243 258 ntBASIC14.74□□□□□ -0.05
Sorl1O88307 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.74□□□□□ -0.05
Sorl1O88307 Psmb5-201ENSMUST00000022803 899 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sorl1O88307 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sorl1O88307 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sorl1O88307 Gpatch2-201ENSMUST00000044812 1639 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Sorl1O88307 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sorl1O88307 Cyp2r1-207ENSMUST00000211506 1887 ntTSL 5 BASIC14.74□□□□□ -0.05
Sorl1O88307 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC14.74□□□□□ -0.05
Sorl1O88307 Cbfb-202ENSMUST00000109392 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sorl1O88307 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sorl1O88307 Gm39115-201ENSMUST00000211350 699 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Sorl1O88307 Gabra5-201ENSMUST00000068456 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sorl1O88307 Klrg2-201ENSMUST00000096030 2276 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Sorl1O88307 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Gas2l1-203ENSMUST00000109895 2530 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Sqstm1-202ENSMUST00000102774 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Gm10602-201ENSMUST00000098239 609 ntBASIC14.73□□□□□ -0.05
Sorl1O88307 Ift57-201ENSMUST00000046777 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Sfrp5-201ENSMUST00000018966 1900 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Sorl1O88307 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Sae1-201ENSMUST00000094815 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Sorl1O88307 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Sorl1O88307 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC14.72□□□□□ -0.05
Sorl1O88307 Nphp1-202ENSMUST00000110357 2296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 Gm13534-201ENSMUST00000121169 513 ntBASIC14.72□□□□□ -0.05
Sorl1O88307 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC14.72□□□□□ -0.05
Sorl1O88307 Pkmyt1-201ENSMUST00000024701 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.72□□□□□ -0.05
Sorl1O88307 Gramd1a-201ENSMUST00000001280 2713 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 B130046B21Rik-201ENSMUST00000181510 2216 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Sorl1O88307 Dxo-201ENSMUST00000046244 1519 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sorl1O88307 Spint1-203ENSMUST00000110817 2323 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sorl1O88307 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sorl1O88307 Gm12669-201ENSMUST00000122162 1009 ntBASIC14.71□□□□□ -0.05
Sorl1O88307 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Sorl1O88307 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC14.71□□□□□ -0.05
Sorl1O88307 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sorl1O88307 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Sorl1O88307 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sorl1O88307 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Sorl1O88307 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC14.71□□□□□ -0.05
Sorl1O88307 Chst12-201ENSMUST00000043050 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sorl1O88307 Tedc1-201ENSMUST00000049271 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sorl1O88307 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
Sorl1O88307 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
Sorl1O88307 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC14.7□□□□□ -0.06
Sorl1O88307 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.7□□□□□ -0.06
Sorl1O88307 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Sorl1O88307 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Rbm7-201ENSMUST00000170000 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sorl1O88307 Rell2-210ENSMUST00000176104 2150 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Sorl1O88307 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Lhx1-204ENSMUST00000184646 1201 ntTSL 5 BASIC14.7□□□□□ -0.06
Sorl1O88307 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Sorl1O88307 Gm10655-201ENSMUST00000098658 1397 ntBASIC14.7□□□□□ -0.06
Sorl1O88307 Dmwd-202ENSMUST00000108479 2388 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Sorl1O88307 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC14.7□□□□□ -0.06
Sorl1O88307 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sorl1O88307 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Sorl1O88307 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Sorl1O88307 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
Sorl1O88307 Gfi1-203ENSMUST00000159164 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sorl1O88307 Gm7290-201ENSMUST00000104990 617 ntBASIC14.69□□□□□ -0.06
Sorl1O88307 Gm12918-201ENSMUST00000120234 636 ntBASIC14.69□□□□□ -0.06
Sorl1O88307 Gm15710-201ENSMUST00000121821 636 ntBASIC14.69□□□□□ -0.06
Sorl1O88307 Gm5075-201ENSMUST00000196916 622 ntBASIC14.69□□□□□ -0.06
Sorl1O88307 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sorl1O88307 Gm4968-201ENSMUST00000071458 858 ntBASIC14.69□□□□□ -0.06
Sorl1O88307 Rpl13-ps6-201ENSMUST00000079761 636 ntBASIC14.69□□□□□ -0.06
Sorl1O88307 Rpl13-ps3-201ENSMUST00000079960 624 ntBASIC14.69□□□□□ -0.06
Sorl1O88307 Khk-204ENSMUST00000201621 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sorl1O88307 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sorl1O88307 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
Sorl1O88307 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Sorl1O88307 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms