Protein–RNA interactions for Protein: O70491

Stra6, Receptor for retinol uptake STRA6, mousemouse

Predictions only

Length 670 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Stra6O70491 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stra6O70491 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC21.15■□□□□ 0.98
Stra6O70491 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Stra6O70491 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Stra6O70491 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Stra6O70491 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC21.14■□□□□ 0.98
Stra6O70491 Gm12473-201ENSMUST00000137535 579 ntTSL 5 BASIC21.14■□□□□ 0.97
Stra6O70491 Gm20760-201ENSMUST00000179197 648 ntBASIC21.14■□□□□ 0.97
Stra6O70491 Skor2-201ENSMUST00000166956 3141 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Stra6O70491 Fkbp9-201ENSMUST00000031795 3009 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Stra6O70491 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Stra6O70491 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stra6O70491 1600012H06Rik-203ENSMUST00000174004 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stra6O70491 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stra6O70491 Thra-201ENSMUST00000064187 2452 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Stra6O70491 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stra6O70491 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stra6O70491 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
Stra6O70491 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC21.13■□□□□ 0.97
Stra6O70491 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stra6O70491 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Stra6O70491 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC21.13■□□□□ 0.97
Stra6O70491 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Stra6O70491 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Stra6O70491 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Stra6O70491 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.12■□□□□ 0.97
Stra6O70491 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 Gm26524-201ENSMUST00000192339 390 ntBASIC21.12■□□□□ 0.97
Stra6O70491 Gm44672-201ENSMUST00000206944 1098 ntBASIC21.12■□□□□ 0.97
Stra6O70491 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
Stra6O70491 Snapc2-201ENSMUST00000011981 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.12■□□□□ 0.97
Stra6O70491 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Stra6O70491 Fam105a-201ENSMUST00000100739 2867 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC21.11■□□□□ 0.97
Stra6O70491 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
Stra6O70491 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Stra6O70491 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC21.1■□□□□ 0.97
Stra6O70491 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC21.1■□□□□ 0.97
Stra6O70491 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Maff-202ENSMUST00000163691 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Gm22240-201ENSMUST00000175225 82 ntBASIC21.1■□□□□ 0.97
Stra6O70491 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Stra6O70491 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC21.09■□□□□ 0.97
Stra6O70491 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stra6O70491 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.09■□□□□ 0.97
Stra6O70491 Gm37856-201ENSMUST00000191634 999 ntBASIC21.09■□□□□ 0.97
Stra6O70491 Tmem126a-201ENSMUST00000032844 799 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Stra6O70491 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Stra6O70491 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
Stra6O70491 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Stra6O70491 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stra6O70491 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Stra6O70491 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stra6O70491 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC21.08■□□□□ 0.97
Stra6O70491 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC21.08■□□□□ 0.97
Stra6O70491 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC21.08■□□□□ 0.97
Stra6O70491 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Stra6O70491 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Stra6O70491 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Stra6O70491 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stra6O70491 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stra6O70491 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stra6O70491 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stra6O70491 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
Stra6O70491 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Stra6O70491 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stra6O70491 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Stra6O70491 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
Stra6O70491 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC21.07■□□□□ 0.96
Stra6O70491 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC21.07■□□□□ 0.96
Stra6O70491 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC21.07■□□□□ 0.96
Stra6O70491 Rab3c-203ENSMUST00000224180 967 ntBASIC21.07■□□□□ 0.96
Stra6O70491 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Stra6O70491 Tex264-203ENSMUST00000169068 1364 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Stra6O70491 Serpinh1-202ENSMUST00000169437 2274 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms