Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ubr1O70481 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Ubr1O70481 Tmem145-201ENSMUST00000108409 2298 ntAPPRIS P2 TSL 2 BASIC25.09■■□□□ 1.61
Ubr1O70481 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ubr1O70481 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Ubr1O70481 Gm10167-201ENSMUST00000150411 1479 ntBASIC25.08■■□□□ 1.61
Ubr1O70481 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ubr1O70481 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ubr1O70481 Gm29241-201ENSMUST00000189260 1096 ntBASIC25.08■■□□□ 1.61
Ubr1O70481 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ubr1O70481 Daxx-202ENSMUST00000170075 2673 ntAPPRIS P2 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ubr1O70481 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
Ubr1O70481 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
Ubr1O70481 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ubr1O70481 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ubr1O70481 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC25.08■■□□□ 1.6
Ubr1O70481 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
Ubr1O70481 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ubr1O70481 Gm5643-201ENSMUST00000117081 966 ntBASIC25.07■■□□□ 1.6
Ubr1O70481 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ubr1O70481 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ubr1O70481 Nbl1-201ENSMUST00000042844 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Ubr1O70481 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Ubr1O70481 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC25.06■■□□□ 1.6
Ubr1O70481 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ubr1O70481 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ubr1O70481 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC25.06■■□□□ 1.6
Ubr1O70481 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
Ubr1O70481 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ubr1O70481 Phf14-203ENSMUST00000115511 3336 ntAPPRIS P1 TSL 5 BASIC25.06■■□□□ 1.6
Ubr1O70481 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Ubr1O70481 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC25.05■■□□□ 1.6
Ubr1O70481 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC25.05■■□□□ 1.6
Ubr1O70481 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC25.05■■□□□ 1.6
Ubr1O70481 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC25.05■■□□□ 1.6
Ubr1O70481 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ubr1O70481 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
Ubr1O70481 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ubr1O70481 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ubr1O70481 Hccs-202ENSMUST00000112115 2473 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Ubr1O70481 Gm2559-201ENSMUST00000201323 363 ntBASIC25.05■■□□□ 1.6
Ubr1O70481 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Ubr1O70481 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 C230037L18Rik-201ENSMUST00000136218 1886 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 Mir7071-201ENSMUST00000184847 69 ntBASIC25.04■■□□□ 1.6
Ubr1O70481 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC25.04■■□□□ 1.6
Ubr1O70481 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 Akip1-201ENSMUST00000033335 1028 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC25.04■■□□□ 1.6
Ubr1O70481 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC25.04■■□□□ 1.6
Ubr1O70481 Esx1-201ENSMUST00000074698 1600 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
Ubr1O70481 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC25.03■■□□□ 1.6
Ubr1O70481 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ubr1O70481 Gm45640-201ENSMUST00000210665 1896 ntBASIC25.03■■□□□ 1.6
Ubr1O70481 AC140264.2-202ENSMUST00000218746 817 ntBASIC25.03■■□□□ 1.6
Ubr1O70481 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ubr1O70481 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ubr1O70481 Cltb-202ENSMUST00000091609 2186 ntAPPRIS P3 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ubr1O70481 Hook2-203ENSMUST00000209764 2516 ntTSL 5 BASIC25.03■■□□□ 1.6
Ubr1O70481 Gm5540-201ENSMUST00000131852 1848 ntBASIC25.03■■□□□ 1.6
Ubr1O70481 Mum1-201ENSMUST00000020365 2640 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Ubr1O70481 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC25.03■■□□□ 1.6
Ubr1O70481 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ubr1O70481 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ubr1O70481 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
Ubr1O70481 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC25.02■■□□□ 1.6
Ubr1O70481 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Ubr1O70481 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
Ubr1O70481 Nfe2-201ENSMUST00000075192 1697 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.6
Ubr1O70481 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ubr1O70481 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ubr1O70481 Rbfox3-202ENSMUST00000069343 1553 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ubr1O70481 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
Ubr1O70481 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC25.01■■□□□ 1.59
Ubr1O70481 Ubl3-201ENSMUST00000079324 2537 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Ubr1O70481 Lsm14a-201ENSMUST00000085585 2944 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ubr1O70481 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Ubr1O70481 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC25■■□□□ 1.59
Ubr1O70481 Gm21863-201ENSMUST00000179133 336 ntAPPRIS P1 BASIC25■■□□□ 1.59
Ubr1O70481 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC25■■□□□ 1.59
Ubr1O70481 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ubr1O70481 Rnf26-206ENSMUST00000216511 2257 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
Ubr1O70481 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ubr1O70481 Irx5-202ENSMUST00000210246 2550 ntTSL 5 BASIC25■■□□□ 1.59
Ubr1O70481 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Ubr1O70481 Gm2399-201ENSMUST00000104944 225 ntBASIC25■■□□□ 1.59
Ubr1O70481 Gm11249-201ENSMUST00000117071 859 ntBASIC25■■□□□ 1.59
Ubr1O70481 Mal2-201ENSMUST00000025356 2950 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ubr1O70481 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ubr1O70481 Inpp5a-201ENSMUST00000026550 2774 ntTSL 1 (best) BASIC25■■□□□ 1.59
Ubr1O70481 Dynll2-201ENSMUST00000020775 2476 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Ubr1O70481 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
Ubr1O70481 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
Ubr1O70481 Triobp-202ENSMUST00000109688 2553 ntAPPRIS ALT2 TSL 1 (best) BASIC24.99■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 119.9 ms