Protein–RNA interactions for Protein: O70209

Pdlim3, PDZ and LIM domain protein 3, mousemouse

Known RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim3O70209 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim3O70209 Mblac1-201ENSMUST00000057773 1308 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
Pdlim3O70209 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim3O70209 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC17.24■□□□□ 0.35
Pdlim3O70209 Gm22238-201ENSMUST00000175222 88 ntBASIC17.24■□□□□ 0.35
Pdlim3O70209 Sec24d-208ENSMUST00000200333 307 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim3O70209 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim3O70209 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim3O70209 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim3O70209 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim3O70209 Gm42911-201ENSMUST00000199360 1630 ntBASIC17.24■□□□□ 0.35
Pdlim3O70209 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pdlim3O70209 Nsfl1c-202ENSMUST00000089140 1486 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
Pdlim3O70209 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pdlim3O70209 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim3O70209 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim3O70209 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim3O70209 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim3O70209 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pdlim3O70209 Tmem260-209ENSMUST00000226422 6333 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Pdlim3O70209 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim3O70209 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC17.23■□□□□ 0.35
Pdlim3O70209 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim3O70209 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC17.23■□□□□ 0.35
Pdlim3O70209 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
Pdlim3O70209 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim3O70209 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim3O70209 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pdlim3O70209 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pdlim3O70209 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pdlim3O70209 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim3O70209 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pdlim3O70209 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim3O70209 2810474O19Rik-201ENSMUST00000046689 6066 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim3O70209 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim3O70209 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim3O70209 Gm14424-201ENSMUST00000143191 895 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim3O70209 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC17.22■□□□□ 0.35
Pdlim3O70209 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim3O70209 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim3O70209 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pdlim3O70209 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC17.22■□□□□ 0.35
Pdlim3O70209 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim3O70209 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Pdlim3O70209 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim3O70209 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim3O70209 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC17.21■□□□□ 0.35
Pdlim3O70209 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC17.21■□□□□ 0.35
Pdlim3O70209 Serp2-204ENSMUST00000228055 705 ntBASIC17.21■□□□□ 0.35
Pdlim3O70209 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pdlim3O70209 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pdlim3O70209 Moap1-201ENSMUST00000173760 1312 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Pdlim3O70209 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
Pdlim3O70209 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Pcgf3-202ENSMUST00000112597 2169 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Pdlim3O70209 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.2■□□□□ 0.34
Pdlim3O70209 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC17.2■□□□□ 0.34
Pdlim3O70209 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pdlim3O70209 Lypla2-202ENSMUST00000105852 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim3O70209 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim3O70209 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Pdlim3O70209 4930452B06Rik-201ENSMUST00000102996 2681 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim3O70209 Asphd1-203ENSMUST00000106340 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim3O70209 Sec61a2-201ENSMUST00000026926 756 ntTSL 5 BASIC17.19■□□□□ 0.34
Pdlim3O70209 Dtymk-201ENSMUST00000027503 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim3O70209 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim3O70209 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim3O70209 Irak1bp1-202ENSMUST00000113245 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim3O70209 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pdlim3O70209 Itga9-201ENSMUST00000044165 7020 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim3O70209 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim3O70209 Ripk2-201ENSMUST00000037035 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim3O70209 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim3O70209 Oxct2a-201ENSMUST00000102640 1760 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Pdlim3O70209 Schip1-206ENSMUST00000182719 2156 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim3O70209 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC17.18■□□□□ 0.34
Pdlim3O70209 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC17.18■□□□□ 0.34
Pdlim3O70209 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim3O70209 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC17.18■□□□□ 0.34
Pdlim3O70209 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim3O70209 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC17.18■□□□□ 0.34
Pdlim3O70209 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Pdlim3O70209 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Pdlim3O70209 Shisa4-201ENSMUST00000041240 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms