Protein–RNA interactions for Protein: O55134

Pcdh12, Protocadherin-12, mousemouse

Predictions only

Length 1,180 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh12O55134 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh12O55134 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh12O55134 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh12O55134 Gm18284-201ENSMUST00000172604 624 ntBASIC17.25■□□□□ 0.35
Pcdh12O55134 Hgfac-206ENSMUST00000202573 434 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh12O55134 Serbp1-216ENSMUST00000205106 1288 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh12O55134 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh12O55134 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh12O55134 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh12O55134 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh12O55134 Gm6802-201ENSMUST00000167843 1983 ntBASIC17.25■□□□□ 0.35
Pcdh12O55134 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC17.25■□□□□ 0.35
Pcdh12O55134 Alg9-201ENSMUST00000034561 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Pcdh12O55134 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh12O55134 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Cdkn3-203ENSMUST00000227149 1952 ntBASIC17.24■□□□□ 0.35
Pcdh12O55134 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Mcam-201ENSMUST00000034650 2989 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdh12O55134 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Hes3-202ENSMUST00000218045 962 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh12O55134 Cmc4-201ENSMUST00000033543 992 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Mtus2-205ENSMUST00000110515 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
Pcdh12O55134 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
Pcdh12O55134 Gm15645-201ENSMUST00000131504 2208 ntTSL 5 BASIC17.24■□□□□ 0.35
Pcdh12O55134 Ndufaf1-202ENSMUST00000110801 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Pcdh12O55134 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
Pcdh12O55134 Fam118a-201ENSMUST00000023069 2543 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Hopxos-201ENSMUST00000148568 1661 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Zmym3-207ENSMUST00000120201 1859 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdh12O55134 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC17.23■□□□□ 0.35
Pcdh12O55134 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC17.23■□□□□ 0.35
Pcdh12O55134 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdh12O55134 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC17.23■□□□□ 0.35
Pcdh12O55134 Spaca1-201ENSMUST00000029927 1197 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Spaca1-202ENSMUST00000084734 1149 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Zdhhc4-201ENSMUST00000001900 1364 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Pcdh12O55134 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Pcdh12O55134 Gm15751-201ENSMUST00000134552 1862 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh12O55134 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh12O55134 Naglu-201ENSMUST00000001802 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh12O55134 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Pcdh12O55134 Nabp2-201ENSMUST00000026439 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh12O55134 Krtap5-3-201ENSMUST00000084414 1074 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh12O55134 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh12O55134 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh12O55134 Mfsd6-205ENSMUST00000156876 4932 ntAPPRIS P4 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh12O55134 Taf4b-201ENSMUST00000169862 5149 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh12O55134 Tsen54-202ENSMUST00000106481 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh12O55134 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC17.22■□□□□ 0.35
Pcdh12O55134 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Pcdh12O55134 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh12O55134 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Pcdh12O55134 Pou2f2-206ENSMUST00000108418 1934 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh12O55134 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdh12O55134 E130218I03Rik-201ENSMUST00000122952 943 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh12O55134 Gm8495-201ENSMUST00000188740 694 ntBASIC17.21■□□□□ 0.35
Pcdh12O55134 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Pcdh12O55134 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh12O55134 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh12O55134 Cbln2-202ENSMUST00000122079 2549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh12O55134 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Pcdh12O55134 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh12O55134 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Pcdh12O55134 Gm5784-201ENSMUST00000179344 2478 ntBASIC17.21■□□□□ 0.34
Pcdh12O55134 Nipa2-202ENSMUST00000117812 3039 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.34
Pcdh12O55134 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh12O55134 Pnldc1-201ENSMUST00000163394 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh12O55134 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh12O55134 Gm12660-201ENSMUST00000123764 664 ntTSL 3 BASIC17.2■□□□□ 0.34
Pcdh12O55134 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh12O55134 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh12O55134 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh12O55134 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh12O55134 Cnih2-201ENSMUST00000025805 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh12O55134 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh12O55134 Zfp692-202ENSMUST00000153510 1887 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Pcdh12O55134 Ddah2-201ENSMUST00000007255 1342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh12O55134 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC17.2■□□□□ 0.34
Pcdh12O55134 AA386476-201ENSMUST00000098781 1665 ntBASIC17.2■□□□□ 0.34
Pcdh12O55134 Tmem179-201ENSMUST00000066791 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Pcdh12O55134 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh12O55134 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh12O55134 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh12O55134 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
Pcdh12O55134 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh12O55134 Gins3-202ENSMUST00000212434 654 ntTSL 2 BASIC17.19■□□□□ 0.34
Pcdh12O55134 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC17.19■□□□□ 0.34
Pcdh12O55134 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Pcdh12O55134 Gm10493-201ENSMUST00000097270 612 ntBASIC17.19■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 28.3 ms