Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SncaO55042 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
SncaO55042 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
SncaO55042 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC15.73■□□□□ 0.11
SncaO55042 Gm14117-201ENSMUST00000122417 843 ntBASIC15.73■□□□□ 0.11
SncaO55042 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC15.73■□□□□ 0.11
SncaO55042 Gm45102-201ENSMUST00000207427 857 ntBASIC15.73■□□□□ 0.11
SncaO55042 Atf1-201ENSMUST00000023769 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SncaO55042 Rnf44-208ENSMUST00000128257 1689 ntTSL 5 BASIC15.73■□□□□ 0.11
SncaO55042 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
SncaO55042 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SncaO55042 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
SncaO55042 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
SncaO55042 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SncaO55042 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SncaO55042 Ascl1-201ENSMUST00000020243 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SncaO55042 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC15.72■□□□□ 0.11
SncaO55042 AC154266.1-201ENSMUST00000223190 503 ntBASIC15.72■□□□□ 0.11
SncaO55042 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
SncaO55042 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
SncaO55042 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SncaO55042 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
SncaO55042 1110004F10Rik-201ENSMUST00000032899 1479 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SncaO55042 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
SncaO55042 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SncaO55042 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SncaO55042 E2f1-202ENSMUST00000103145 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SncaO55042 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC15.71■□□□□ 0.11
SncaO55042 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC15.71■□□□□ 0.11
SncaO55042 Alad-201ENSMUST00000030090 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SncaO55042 Kmt5b-201ENSMUST00000005518 1283 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
SncaO55042 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC15.71■□□□□ 0.11
SncaO55042 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC15.71■□□□□ 0.11
SncaO55042 Dnajb11-205ENSMUST00000178320 1628 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
SncaO55042 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
SncaO55042 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SncaO55042 Mcu-202ENSMUST00000020312 2872 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SncaO55042 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 6820408C15Rik-201ENSMUST00000039961 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Spsb4-201ENSMUST00000055433 2720 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Naa20-202ENSMUST00000110000 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Gm20621-202ENSMUST00000176618 1234 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC15.7■□□□□ 0.1
SncaO55042 Ankrd17-203ENSMUST00000168058 9311 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SncaO55042 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SncaO55042 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SncaO55042 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Tmem55b-205ENSMUST00000160835 2755 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC15.69■□□□□ 0.1
SncaO55042 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC15.69■□□□□ 0.1
SncaO55042 Serbp1-212ENSMUST00000204294 717 ntTSL 5 BASIC15.69■□□□□ 0.1
SncaO55042 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC15.69■□□□□ 0.1
SncaO55042 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC15.69■□□□□ 0.1
SncaO55042 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Gm13830-204ENSMUST00000149609 1851 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Tesk1-201ENSMUST00000060864 3947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
SncaO55042 Ulk1-201ENSMUST00000031490 5213 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Tmf1-201ENSMUST00000095664 5732 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SncaO55042 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Gnb5-206ENSMUST00000215875 2105 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Gm9954-202ENSMUST00000198686 4725 ntBASIC15.68■□□□□ 0.1
SncaO55042 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Gm11586-201ENSMUST00000123060 566 ntTSL 2 BASIC15.68■□□□□ 0.1
SncaO55042 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC15.68■□□□□ 0.1
SncaO55042 Sumf1-206ENSMUST00000172188 723 ntTSL 5 BASIC15.68■□□□□ 0.1
SncaO55042 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC15.68■□□□□ 0.1
SncaO55042 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SncaO55042 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Clk3-201ENSMUST00000065330 2496 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SncaO55042 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SncaO55042 Egln1-201ENSMUST00000034469 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SncaO55042 Rcor3-203ENSMUST00000192128 1578 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SncaO55042 Tomm40-202ENSMUST00000093552 1577 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SncaO55042 Foxa2-201ENSMUST00000047315 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SncaO55042 Rnaseh2b-201ENSMUST00000022499 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SncaO55042 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SncaO55042 AC126028.2-201ENSMUST00000228100 1833 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms