Protein–RNA interactions for Protein: O54942

Cldn5, Claudin-5, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn5O54942 Ube2d-ps-204ENSMUST00000137510 1846 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn5O54942 Rab3il1-201ENSMUST00000113161 2225 ntAPPRIS P3 TSL 5 BASIC19.83■□□□□ 0.76
Cldn5O54942 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn5O54942 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.76
Cldn5O54942 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn5O54942 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn5O54942 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn5O54942 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
Cldn5O54942 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cldn5O54942 Hexa-201ENSMUST00000026262 1996 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn5O54942 Dxo-211ENSMUST00000180043 1447 ntAPPRIS P1 TSL 5 BASIC19.82■□□□□ 0.76
Cldn5O54942 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn5O54942 Rfk-201ENSMUST00000025617 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn5O54942 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Cldn5O54942 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC19.81■□□□□ 0.76
Cldn5O54942 Zfp444-203ENSMUST00000108566 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn5O54942 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn5O54942 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC19.81■□□□□ 0.76
Cldn5O54942 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cldn5O54942 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn5O54942 Gm42555-201ENSMUST00000199304 1039 ntBASIC19.81■□□□□ 0.76
Cldn5O54942 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cldn5O54942 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC19.81■□□□□ 0.76
Cldn5O54942 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Cldn5O54942 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
Cldn5O54942 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.8■□□□□ 0.76
Cldn5O54942 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn5O54942 Ildr2-204ENSMUST00000192732 2263 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn5O54942 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC19.8■□□□□ 0.76
Cldn5O54942 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn5O54942 Rbks-201ENSMUST00000031018 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn5O54942 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn5O54942 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC19.8■□□□□ 0.76
Cldn5O54942 Hipk1-201ENSMUST00000029438 4185 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn5O54942 Gm10655-201ENSMUST00000098658 1397 ntBASIC19.8■□□□□ 0.76
Cldn5O54942 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Cldn5O54942 1700003E16Rik-201ENSMUST00000032106 2020 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
Cldn5O54942 Trmt61a-202ENSMUST00000168338 2131 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
Cldn5O54942 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn5O54942 Runx1-203ENSMUST00000168195 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn5O54942 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn5O54942 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn5O54942 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn5O54942 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Cldn5O54942 Gm10602-201ENSMUST00000098239 609 ntBASIC19.79■□□□□ 0.76
Cldn5O54942 Adgrv1-211ENSMUST00000146749 1592 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn5O54942 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn5O54942 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Cldn5O54942 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Cldn5O54942 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
Cldn5O54942 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn5O54942 Bmpr1b-202ENSMUST00000098568 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Cldn5O54942 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.78■□□□□ 0.76
Cldn5O54942 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn5O54942 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn5O54942 Ciapin1-201ENSMUST00000034233 1807 ntAPPRIS P1 TSL 5 BASIC19.77■□□□□ 0.76
Cldn5O54942 Zbtb4-203ENSMUST00000108640 4067 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn5O54942 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.77■□□□□ 0.76
Cldn5O54942 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.77■□□□□ 0.76
Cldn5O54942 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn5O54942 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC19.77■□□□□ 0.76
Cldn5O54942 1810055G02Rik-201ENSMUST00000039048 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Cldn5O54942 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Cldn5O54942 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC19.77■□□□□ 0.75
Cldn5O54942 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn5O54942 Mapre3-202ENSMUST00000200692 1816 ntTSL 5 BASIC19.76■□□□□ 0.75
Cldn5O54942 D5Ertd579e-204ENSMUST00000140653 2014 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn5O54942 Hoxa10-202ENSMUST00000125581 2565 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn5O54942 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn5O54942 9430060I03Rik-201ENSMUST00000191563 1689 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn5O54942 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn5O54942 Gm12933-201ENSMUST00000120203 872 ntBASIC19.76■□□□□ 0.75
Cldn5O54942 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
Cldn5O54942 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
Cldn5O54942 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Cldn5O54942 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC19.76■□□□□ 0.75
Cldn5O54942 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cldn5O54942 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn5O54942 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Cldn5O54942 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn5O54942 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.75■□□□□ 0.75
Cldn5O54942 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn5O54942 Fgf3-201ENSMUST00000105898 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn5O54942 Lhx8-201ENSMUST00000177846 2076 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn5O54942 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.75■□□□□ 0.75
Cldn5O54942 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn5O54942 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn5O54942 Rin3-202ENSMUST00000101114 2394 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn5O54942 Plekha1-211ENSMUST00000151119 2397 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Cldn5O54942 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cldn5O54942 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Cldn5O54942 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.74■□□□□ 0.75
Cldn5O54942 Zfand3-202ENSMUST00000226208 923 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
Cldn5O54942 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn5O54942 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn5O54942 Gm6365-201ENSMUST00000054711 744 ntBASIC19.74■□□□□ 0.75
Cldn5O54942 Golph3-202ENSMUST00000226517 2359 ntBASIC19.74■□□□□ 0.75
Cldn5O54942 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn5O54942 Mael-201ENSMUST00000038782 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Cldn5O54942 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms