Protein–RNA interactions for Protein: O54785

Limk2, LIM domain kinase 2, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Limk2O54785 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Gm9988-201ENSMUST00000069786 435 ntBASIC19.35■□□□□ 0.69
Limk2O54785 Gm16505-202ENSMUST00000220976 1626 ntTSL 5 BASIC19.35■□□□□ 0.69
Limk2O54785 Disc1-204ENSMUST00000115885 2408 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Limk2O54785 Disc1-202ENSMUST00000075730 2408 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
Limk2O54785 Ezh2-204ENSMUST00000114618 2775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Chtf8-201ENSMUST00000169312 2730 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Limk2O54785 Sstr4-201ENSMUST00000109962 1424 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Limk2O54785 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC19.34■□□□□ 0.69
Limk2O54785 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Limk2O54785 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Limk2O54785 Kctd17-206ENSMUST00000162517 901 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Limk2O54785 Kctd17-209ENSMUST00000166142 826 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Limk2O54785 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC19.34■□□□□ 0.69
Limk2O54785 Gm30085-201ENSMUST00000209694 594 ntTSL 3 BASIC19.34■□□□□ 0.69
Limk2O54785 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC19.34■□□□□ 0.69
Limk2O54785 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.34■□□□□ 0.69
Limk2O54785 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Limk2O54785 Gm37352-201ENSMUST00000193908 2181 ntBASIC19.34■□□□□ 0.69
Limk2O54785 Meis3-205ENSMUST00000176506 1839 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Limk2O54785 Cacna2d2-201ENSMUST00000010210 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Limk2O54785 Neurl4-213ENSMUST00000177476 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Limk2O54785 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Limk2O54785 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC19.33■□□□□ 0.68
Limk2O54785 P4hb-203ENSMUST00000168360 770 ntTSL 3 BASIC19.33■□□□□ 0.68
Limk2O54785 Mpzl1-210ENSMUST00000194437 643 ntTSL 3 BASIC19.33■□□□□ 0.68
Limk2O54785 Prmt1-210ENSMUST00000208829 621 ntTSL 5 BASIC19.33■□□□□ 0.68
Limk2O54785 AC124603.1-201ENSMUST00000223843 308 ntBASIC19.33■□□□□ 0.68
Limk2O54785 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Limk2O54785 Doc2a-201ENSMUST00000064110 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Limk2O54785 Tk2-201ENSMUST00000050211 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Limk2O54785 Kansl1-204ENSMUST00000106972 5427 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Limk2O54785 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Limk2O54785 Gm3667-201ENSMUST00000171906 2053 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Limk2O54785 Sept7-201ENSMUST00000115272 2533 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Limk2O54785 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk2O54785 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk2O54785 D030062O11Rik-201ENSMUST00000192660 2806 ntBASIC19.32■□□□□ 0.68
Limk2O54785 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk2O54785 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
Limk2O54785 Numbl-201ENSMUST00000079258 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Limk2O54785 Qpct-201ENSMUST00000040789 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk2O54785 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk2O54785 Gm12933-201ENSMUST00000120203 872 ntBASIC19.31■□□□□ 0.68
Limk2O54785 Gm7860-201ENSMUST00000121190 879 ntBASIC19.31■□□□□ 0.68
Limk2O54785 Tex30-212ENSMUST00000152239 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk2O54785 Dlx6-203ENSMUST00000171311 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk2O54785 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC19.31■□□□□ 0.68
Limk2O54785 Sap30-201ENSMUST00000034022 1178 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk2O54785 Eif2b4-212ENSMUST00000202758 1767 ntTSL 5 BASIC19.31■□□□□ 0.68
Limk2O54785 E030030I06Rik-202ENSMUST00000179054 2081 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
Limk2O54785 Slc11a1-211ENSMUST00000187516 1893 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Limk2O54785 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Limk2O54785 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC19.3■□□□□ 0.68
Limk2O54785 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Limk2O54785 Atmin-201ENSMUST00000109099 4877 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Limk2O54785 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Limk2O54785 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Limk2O54785 Nkx2-1-202ENSMUST00000178477 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Limk2O54785 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
Limk2O54785 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Limk2O54785 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
Limk2O54785 E4f1-205ENSMUST00000226941 2642 ntAPPRIS ALT2 BASIC19.3■□□□□ 0.68
Limk2O54785 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Limk2O54785 Csnk1a1-210ENSMUST00000170862 2259 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
Limk2O54785 Sept7-202ENSMUST00000165594 2516 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Limk2O54785 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 Gfra4-205ENSMUST00000110239 810 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 Lsm2-201ENSMUST00000007266 873 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 Hpca-201ENSMUST00000030572 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 Cstf2-202ENSMUST00000113286 2717 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 Mgat4b-201ENSMUST00000041725 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Limk2O54785 Gmpr-201ENSMUST00000000260 1580 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk2O54785 Aen-202ENSMUST00000107423 2230 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
Limk2O54785 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Limk2O54785 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19.28■□□□□ 0.68
Limk2O54785 Gm12669-201ENSMUST00000122162 1009 ntBASIC19.28■□□□□ 0.68
Limk2O54785 Ap4s1-201ENSMUST00000021338 1035 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk2O54785 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk2O54785 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC19.28■□□□□ 0.68
Limk2O54785 Aadat-201ENSMUST00000079472 1972 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Limk2O54785 Trim72-202ENSMUST00000106248 2134 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
Limk2O54785 Zbtb7c-202ENSMUST00000167921 2147 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk2O54785 Nipsnap2-205ENSMUST00000186265 1600 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
Limk2O54785 Prcd-205ENSMUST00000178875 1227 ntTSL 5 BASIC19.27■□□□□ 0.68
Limk2O54785 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Limk2O54785 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC19.27■□□□□ 0.68
Limk2O54785 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.27■□□□□ 0.68
Limk2O54785 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Limk2O54785 Runx2-210ENSMUST00000162373 1565 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
Limk2O54785 Slc30a4-201ENSMUST00000005952 5458 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Limk2O54785 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Limk2O54785 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC19.27■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms