Protein–RNA interactions for Protein: O35906

Spib, Transcription factor Spi-B, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SpibO35906 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC21.19■□□□□ 0.98
SpibO35906 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SpibO35906 1700067K01Rik-201ENSMUST00000060357 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
SpibO35906 Cd82-201ENSMUST00000028644 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SpibO35906 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC21.19■□□□□ 0.98
SpibO35906 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SpibO35906 Vgf-202ENSMUST00000186451 2277 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
SpibO35906 Bola3-207ENSMUST00000136501 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SpibO35906 Syt5-201ENSMUST00000065957 1750 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SpibO35906 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SpibO35906 Cmc1-201ENSMUST00000044220 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
SpibO35906 Agtpbp1-222ENSMUST00000171606 3037 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SpibO35906 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
SpibO35906 Pou2f2-210ENSMUST00000176408 1697 ntTSL 5 BASIC21.18■□□□□ 0.98
SpibO35906 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC21.17■□□□□ 0.98
SpibO35906 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
SpibO35906 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC21.17■□□□□ 0.98
SpibO35906 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SpibO35906 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC21.17■□□□□ 0.98
SpibO35906 Gm26708-203ENSMUST00000208236 1624 ntTSL 5 BASIC21.17■□□□□ 0.98
SpibO35906 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
SpibO35906 Lsr-205ENSMUST00000205961 2021 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SpibO35906 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SpibO35906 Gm45640-201ENSMUST00000210665 1896 ntBASIC21.16■□□□□ 0.98
SpibO35906 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SpibO35906 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SpibO35906 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC21.16■□□□□ 0.98
SpibO35906 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC21.16■□□□□ 0.98
SpibO35906 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
SpibO35906 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SpibO35906 Ppp1r14c-201ENSMUST00000043374 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Ssx2ip-203ENSMUST00000106151 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC21.15■□□□□ 0.98
SpibO35906 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC21.15■□□□□ 0.98
SpibO35906 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC21.15■□□□□ 0.98
SpibO35906 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
SpibO35906 Ccng2-201ENSMUST00000031331 2810 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Porcn-202ENSMUST00000082320 1883 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Cyp4f13-201ENSMUST00000075253 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
SpibO35906 Slc35d3-201ENSMUST00000059805 2630 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SpibO35906 Mtfr1l-201ENSMUST00000102550 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
SpibO35906 Fgf2os-201ENSMUST00000153785 1441 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
SpibO35906 Fgfr2-217ENSMUST00000124096 2425 ntTSL 5 BASIC21.14■□□□□ 0.97
SpibO35906 Zbed3-201ENSMUST00000045909 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SpibO35906 Cox18-201ENSMUST00000048363 1333 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SpibO35906 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SpibO35906 Hspe1-201ENSMUST00000075242 774 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SpibO35906 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
SpibO35906 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
SpibO35906 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SpibO35906 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC21.14■□□□□ 0.97
SpibO35906 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC21.14■□□□□ 0.97
SpibO35906 Kctd9-201ENSMUST00000078053 3157 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SpibO35906 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SpibO35906 Gm12896-201ENSMUST00000118430 226 ntBASIC21.13■□□□□ 0.97
SpibO35906 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
SpibO35906 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC21.13■□□□□ 0.97
SpibO35906 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SpibO35906 Rell2-202ENSMUST00000091932 1995 ntTSL 2 BASIC21.13■□□□□ 0.97
SpibO35906 Kcne1l-201ENSMUST00000134825 1543 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
SpibO35906 Crlf2-203ENSMUST00000200284 1405 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
SpibO35906 Kctd2-202ENSMUST00000106533 2649 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SpibO35906 Rilpl2-201ENSMUST00000031347 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SpibO35906 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SpibO35906 Gm37352-201ENSMUST00000193908 2181 ntBASIC21.12■□□□□ 0.97
SpibO35906 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC21.12■□□□□ 0.97
SpibO35906 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC21.12■□□□□ 0.97
SpibO35906 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SpibO35906 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC21.12■□□□□ 0.97
SpibO35906 Barx2-201ENSMUST00000116615 1968 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SpibO35906 Fblim1-202ENSMUST00000105784 3036 ntAPPRIS P1 TSL 5 BASIC21.12■□□□□ 0.97
SpibO35906 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
SpibO35906 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SpibO35906 Gprc5c-201ENSMUST00000021071 2200 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
SpibO35906 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SpibO35906 Pigt-202ENSMUST00000117066 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
SpibO35906 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SpibO35906 Lrrc36-204ENSMUST00000213547 2396 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
SpibO35906 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SpibO35906 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SpibO35906 Schip1-205ENSMUST00000182532 2059 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SpibO35906 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SpibO35906 Gm11769-201ENSMUST00000140273 1657 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SpibO35906 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC21.1■□□□□ 0.97
SpibO35906 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SpibO35906 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SpibO35906 Adrb1-201ENSMUST00000038949 2491 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
SpibO35906 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SpibO35906 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 AB124611-202ENSMUST00000086361 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 Anks3-201ENSMUST00000023157 2483 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
SpibO35906 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms