Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
Abca4O35600 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abca4O35600 A330009N23Rik-201ENSMUST00000180639 1392 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Abca4O35600 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Abca4O35600 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abca4O35600 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Abca4O35600 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca4O35600 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca4O35600 Mid2-201ENSMUST00000112988 2525 ntTSL 5 BASIC18.06■□□□□ 0.48
Abca4O35600 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca4O35600 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca4O35600 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca4O35600 AC107452.1-201ENSMUST00000227963 481 ntBASIC18.06■□□□□ 0.48
Abca4O35600 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca4O35600 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca4O35600 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Abca4O35600 Hpse-202ENSMUST00000112908 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Abca4O35600 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Gm14859-201ENSMUST00000117752 357 ntBASIC18.05■□□□□ 0.48
Abca4O35600 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC18.05■□□□□ 0.48
Abca4O35600 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Smox-207ENSMUST00000110186 2170 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Abca4O35600 Gm7284-201ENSMUST00000131667 944 ntBASIC18.04■□□□□ 0.48
Abca4O35600 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC18.04■□□□□ 0.48
Abca4O35600 Psenen-201ENSMUST00000043898 708 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abca4O35600 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abca4O35600 Maf1-201ENSMUST00000023212 1686 ntAPPRIS P2 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abca4O35600 Vti1b-201ENSMUST00000055262 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
Abca4O35600 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Abca4O35600 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
Abca4O35600 AC142113.1-201ENSMUST00000214931 801 ntTSL 5 BASIC18.04■□□□□ 0.48
Abca4O35600 AC154266.1-201ENSMUST00000223190 503 ntBASIC18.04■□□□□ 0.48
Abca4O35600 Clta-202ENSMUST00000107846 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca4O35600 Gm28033-201ENSMUST00000184224 96 ntBASIC18.03■□□□□ 0.48
Abca4O35600 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca4O35600 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca4O35600 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
Abca4O35600 AC153962.1-201ENSMUST00000218530 1948 ntBASIC18.03■□□□□ 0.48
Abca4O35600 Usp2-202ENSMUST00000065461 2057 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca4O35600 Shc4-202ENSMUST00000110477 1988 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Abca4O35600 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Abca4O35600 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC18.03■□□□□ 0.48
Abca4O35600 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Abca4O35600 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC18.03■□□□□ 0.48
Abca4O35600 Zbtb7a-203ENSMUST00000119606 1841 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abca4O35600 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abca4O35600 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Abca4O35600 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Abca4O35600 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Abca4O35600 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.01■□□□□ 0.47
Abca4O35600 K230010J24Rik-204ENSMUST00000187868 1810 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
Abca4O35600 Reep6-207ENSMUST00000186864 2015 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Timm23-208ENSMUST00000226683 750 ntBASIC18.01■□□□□ 0.47
Abca4O35600 Mgarp-201ENSMUST00000038154 1232 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Abca4O35600 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Abca4O35600 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC18■□□□□ 0.47
Abca4O35600 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abca4O35600 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC18■□□□□ 0.47
Abca4O35600 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abca4O35600 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abca4O35600 Morf4l1-201ENSMUST00000085248 1882 ntTSL 1 (best) BASIC18■□□□□ 0.47
Abca4O35600 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Abca4O35600 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Abca4O35600 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abca4O35600 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abca4O35600 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
Abca4O35600 Adap2-201ENSMUST00000021050 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca4O35600 Gm27032-201ENSMUST00000183124 1116 ntBASIC17.99■□□□□ 0.47
Abca4O35600 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC17.99■□□□□ 0.47
Abca4O35600 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca4O35600 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca4O35600 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC17.99■□□□□ 0.47
Abca4O35600 AC124581.1-201ENSMUST00000225416 1399 ntBASIC17.99■□□□□ 0.47
Abca4O35600 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Abca4O35600 Arhgap9-204ENSMUST00000219511 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca4O35600 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Abca4O35600 Gm7102-201ENSMUST00000180168 1624 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Abca4O35600 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
Abca4O35600 Umpk-ps-201ENSMUST00000211897 827 ntBASIC17.99■□□□□ 0.47
Abca4O35600 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Sirt7-202ENSMUST00000106183 427 ntTSL 3 BASIC17.98■□□□□ 0.47
Abca4O35600 Gm7860-201ENSMUST00000121190 879 ntBASIC17.98■□□□□ 0.47
Abca4O35600 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC17.98■□□□□ 0.47
Abca4O35600 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Abca4O35600 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.98■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 12.9 ms