Protein–RNA interactions for Protein: O35544

Slc1a6, Excitatory amino acid transporter 4, mousemouse

Predictions only

Length 561 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc1a6O35544 Slc25a10-201ENSMUST00000026899 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a6O35544 Ly6h-206ENSMUST00000156032 752 ntAPPRIS P3 TSL 3 BASIC18.75■□□□□ 0.59
Slc1a6O35544 Gm22238-201ENSMUST00000175222 88 ntBASIC18.75■□□□□ 0.59
Slc1a6O35544 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a6O35544 Grk6-206ENSMUST00000224995 2971 ntBASIC18.75■□□□□ 0.59
Slc1a6O35544 Ly6h-201ENSMUST00000023241 906 ntAPPRIS ALT1 TSL 2 BASIC18.75■□□□□ 0.59
Slc1a6O35544 Gpc6-204ENSMUST00000125435 2423 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a6O35544 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a6O35544 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
Slc1a6O35544 Mprip-203ENSMUST00000108751 4021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Slc1a6O35544 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Gm43182-201ENSMUST00000199476 2528 ntBASIC18.74■□□□□ 0.59
Slc1a6O35544 Gm26798-201ENSMUST00000181384 2837 ntTSL 5 BASIC18.74■□□□□ 0.59
Slc1a6O35544 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Gm10300-201ENSMUST00000094662 2296 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slc1a6O35544 Mmp15-201ENSMUST00000034243 5135 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Anp32e-210ENSMUST00000171368 878 ntTSL 3 BASIC18.74■□□□□ 0.59
Slc1a6O35544 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Slc1a6O35544 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Slc1a6O35544 Cdkl3-206ENSMUST00000109079 2051 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Slc1a6O35544 Cdkl3-208ENSMUST00000109081 2063 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Slc1a6O35544 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Fbxo7-202ENSMUST00000117597 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc1a6O35544 Fam78b-205ENSMUST00000165874 4986 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Fuz-214ENSMUST00000209132 853 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC18.73■□□□□ 0.59
Slc1a6O35544 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Trim47-202ENSMUST00000106441 2192 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Tmem62-201ENSMUST00000067582 2921 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Slc1a6O35544 Gm5953-201ENSMUST00000220644 2616 ntBASIC18.72■□□□□ 0.59
Slc1a6O35544 Mtg1-201ENSMUST00000036977 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Miga1-201ENSMUST00000068243 2689 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Mpg-201ENSMUST00000020528 1737 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Impdh2-201ENSMUST00000081111 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Gm14486-201ENSMUST00000144704 644 ntTSL 3 BASIC18.72■□□□□ 0.59
Slc1a6O35544 Rnf187-202ENSMUST00000217262 711 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Dgcr6-201ENSMUST00000066027 1050 ntAPPRIS P4 TSL 2 BASIC18.72■□□□□ 0.59
Slc1a6O35544 Pgs1-203ENSMUST00000132676 2863 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Them6-201ENSMUST00000070923 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Hnrnpab-203ENSMUST00000109103 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Ttyh3-201ENSMUST00000042661 4658 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 March11-202ENSMUST00000140840 1558 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
Slc1a6O35544 Rap1b-201ENSMUST00000064667 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Slc1a6O35544 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a6O35544 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a6O35544 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a6O35544 Arid1b-201ENSMUST00000092723 7150 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slc1a6O35544 A730098A19Rik-201ENSMUST00000188193 978 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a6O35544 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a6O35544 C1ql4-201ENSMUST00000064462 874 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a6O35544 Rnf112-201ENSMUST00000054927 3086 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a6O35544 Zfp618-201ENSMUST00000030043 1582 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a6O35544 Ica1-203ENSMUST00000115519 1706 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
Slc1a6O35544 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
Slc1a6O35544 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
Slc1a6O35544 Gm26694-201ENSMUST00000180868 1902 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a6O35544 5330438D12Rik-201ENSMUST00000064101 2229 ntBASIC18.7■□□□□ 0.58
Slc1a6O35544 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc1a6O35544 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
Slc1a6O35544 Nol4l-201ENSMUST00000035346 6399 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a6O35544 Hrasls-204ENSMUST00000162747 854 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a6O35544 Tor3a-208ENSMUST00000190607 453 ntTSL 3 BASIC18.7■□□□□ 0.58
Slc1a6O35544 Gltpd2-201ENSMUST00000057685 1216 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a6O35544 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a6O35544 Chst7-201ENSMUST00000044138 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a6O35544 Maff-201ENSMUST00000096350 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a6O35544 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Slc1a6O35544 Gm7856-201ENSMUST00000117514 1493 ntBASIC18.7■□□□□ 0.58
Slc1a6O35544 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Slc1a6O35544 Runx2-204ENSMUST00000159943 2316 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a6O35544 Gm15853-202ENSMUST00000195518 2041 ntBASIC18.69■□□□□ 0.58
Slc1a6O35544 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a6O35544 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a6O35544 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a6O35544 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
Slc1a6O35544 Mgarp-202ENSMUST00000108046 1409 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Slc1a6O35544 Stard4-203ENSMUST00000119991 941 ntTSL 5 BASIC18.69■□□□□ 0.58
Slc1a6O35544 Gm2415-203ENSMUST00000149952 435 ntTSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms