Protein–RNA interactions for Protein: O35491

Clk2, Dual specificity protein kinase CLK2, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk2O35491 AC167978.1-201ENSMUST00000182488 456 ntTSL 3 BASIC20.8■□□□□ 0.92
Clk2O35491 AC175538.2-202ENSMUST00000224997 1057 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clk2O35491 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clk2O35491 Bhlhe23-201ENSMUST00000108878 2520 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
Clk2O35491 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clk2O35491 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clk2O35491 Lpar3-201ENSMUST00000039164 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clk2O35491 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clk2O35491 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC20.8■□□□□ 0.92
Clk2O35491 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Clk2O35491 Trim72-201ENSMUST00000081042 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Clk2O35491 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clk2O35491 Ube2d2a-202ENSMUST00000170693 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clk2O35491 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clk2O35491 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Clk2O35491 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clk2O35491 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
Clk2O35491 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Clk2O35491 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
Clk2O35491 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
Clk2O35491 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clk2O35491 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clk2O35491 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clk2O35491 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clk2O35491 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clk2O35491 2610528J11Rik-202ENSMUST00000106367 736 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
Clk2O35491 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
Clk2O35491 Cers1-203ENSMUST00000165819 2728 ntAPPRIS P4 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clk2O35491 6030419C18Rik-201ENSMUST00000085658 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clk2O35491 Chtop-202ENSMUST00000049937 2012 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Clk2O35491 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
Clk2O35491 Gm37352-201ENSMUST00000193908 2181 ntBASIC20.78■□□□□ 0.92
Clk2O35491 Siah2-201ENSMUST00000070368 2511 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clk2O35491 Clasp2-211ENSMUST00000216817 2234 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Clk2O35491 Psmd3-201ENSMUST00000017365 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clk2O35491 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clk2O35491 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
Clk2O35491 Ypel3-201ENSMUST00000038614 973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Clk2O35491 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC20.77■□□□□ 0.92
Clk2O35491 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clk2O35491 Gm26971-201ENSMUST00000182423 1072 ntBASIC20.76■□□□□ 0.91
Clk2O35491 Anapc13-204ENSMUST00000190279 589 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clk2O35491 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC20.76■□□□□ 0.91
Clk2O35491 Spcs1-207ENSMUST00000228767 1008 ntBASIC20.76■□□□□ 0.91
Clk2O35491 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clk2O35491 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clk2O35491 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Clk2O35491 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clk2O35491 Cd24a-201ENSMUST00000058714 1816 ntAPPRIS P2 TSL 1 (best) BASIC20.76■□□□□ 0.91
Clk2O35491 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
Clk2O35491 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clk2O35491 P2ry2-202ENSMUST00000178340 2137 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clk2O35491 E4f1-201ENSMUST00000056032 2574 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clk2O35491 3110062M04Rik-202ENSMUST00000115006 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clk2O35491 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clk2O35491 Gm6211-202ENSMUST00000167849 925 ntBASIC20.75■□□□□ 0.91
Clk2O35491 Mcrip2-201ENSMUST00000026828 816 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clk2O35491 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clk2O35491 Hoxc6-201ENSMUST00000001711 1581 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clk2O35491 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Clk2O35491 Cdkl3-204ENSMUST00000109077 2605 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
Clk2O35491 Vstm2b-201ENSMUST00000044705 2627 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Clk2O35491 Baiap2-203ENSMUST00000103021 3398 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clk2O35491 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC20.74■□□□□ 0.91
Clk2O35491 Tcp11-201ENSMUST00000042692 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clk2O35491 H19-202ENSMUST00000136359 2286 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Clk2O35491 Cdk13-201ENSMUST00000042365 5202 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clk2O35491 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC20.74■□□□□ 0.91
Clk2O35491 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC20.74■□□□□ 0.91
Clk2O35491 Spns2-201ENSMUST00000045303 3241 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clk2O35491 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clk2O35491 Ankrd37-201ENSMUST00000053558 927 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clk2O35491 Gm4968-201ENSMUST00000071458 858 ntBASIC20.74■□□□□ 0.91
Clk2O35491 Slc35f5-201ENSMUST00000027580 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clk2O35491 Gal3st3-201ENSMUST00000061169 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Clk2O35491 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Mreg-201ENSMUST00000048860 2284 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Vim-206ENSMUST00000193675 1777 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Clk2O35491 Smim27-201ENSMUST00000129758 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
Clk2O35491 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Samd10-201ENSMUST00000060173 2164 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Sstr1-201ENSMUST00000044299 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Eif2b4-203ENSMUST00000166769 1878 ntTSL 5 BASIC20.73■□□□□ 0.91
Clk2O35491 Dgat1-201ENSMUST00000023214 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Clk2O35491 Grin2c-202ENSMUST00000106554 4895 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Clk2O35491 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clk2O35491 Donson-203ENSMUST00000117159 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clk2O35491 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
Clk2O35491 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Clk2O35491 Gm12441-201ENSMUST00000121806 588 ntBASIC20.72■□□□□ 0.91
Clk2O35491 Gm44238-201ENSMUST00000203300 353 ntTSL 3 BASIC20.72■□□□□ 0.91
Clk2O35491 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC20.72■□□□□ 0.91
Clk2O35491 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clk2O35491 Cdo1-201ENSMUST00000035804 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clk2O35491 Smad4-201ENSMUST00000025393 3384 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Clk2O35491 Desi2-204ENSMUST00000161075 2590 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms