Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
Col15a1O35206 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col15a1O35206 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
Col15a1O35206 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col15a1O35206 Gm43672-201ENSMUST00000199072 1731 ntBASIC24.68■■□□□ 1.54
Col15a1O35206 Khdc3-201ENSMUST00000034737 1681 ntAPPRIS P3 TSL 1 (best) BASIC24.68■■□□□ 1.54
Col15a1O35206 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
Col15a1O35206 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col15a1O35206 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col15a1O35206 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC24.67■■□□□ 1.54
Col15a1O35206 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC24.67■■□□□ 1.54
Col15a1O35206 Gm22325-201ENSMUST00000158904 308 ntBASIC24.67■■□□□ 1.54
Col15a1O35206 Gm10698-201ENSMUST00000182663 604 ntBASIC24.67■■□□□ 1.54
Col15a1O35206 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC24.67■■□□□ 1.54
Col15a1O35206 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
Col15a1O35206 Meis3-201ENSMUST00000002495 1731 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col15a1O35206 Cpne2-202ENSMUST00000109537 2121 ntAPPRIS ALT2 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col15a1O35206 Lhpp-202ENSMUST00000106170 999 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Col15a1O35206 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC24.66■■□□□ 1.54
Col15a1O35206 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC24.66■■□□□ 1.54
Col15a1O35206 Uqcrc1-201ENSMUST00000026743 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col15a1O35206 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col15a1O35206 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col15a1O35206 Hras-207ENSMUST00000168550 2272 ntTSL 5 BASIC24.65■■□□□ 1.54
Col15a1O35206 Stoml1-201ENSMUST00000034883 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col15a1O35206 Lgmn-202ENSMUST00000110020 1835 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col15a1O35206 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col15a1O35206 Nhlh1-201ENSMUST00000059794 2464 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col15a1O35206 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC24.65■■□□□ 1.54
Col15a1O35206 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC24.65■■□□□ 1.54
Col15a1O35206 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC24.65■■□□□ 1.54
Col15a1O35206 Gm7977-201ENSMUST00000193787 748 ntBASIC24.65■■□□□ 1.54
Col15a1O35206 Zfp69-201ENSMUST00000106280 2362 ntAPPRIS P1 TSL 5 BASIC24.65■■□□□ 1.54
Col15a1O35206 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
Col15a1O35206 Tmem250-ps-201ENSMUST00000133808 2483 ntTSL 2 BASIC24.64■■□□□ 1.54
Col15a1O35206 Marc1-202ENSMUST00000110992 2152 ntAPPRIS ALT2 TSL 5 BASIC24.64■■□□□ 1.54
Col15a1O35206 Klhl32-201ENSMUST00000084781 2287 ntTSL 1 (best) BASIC24.64■■□□□ 1.53
Col15a1O35206 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.53
Col15a1O35206 AC135963.1-201ENSMUST00000211640 717 ntBASIC24.64■■□□□ 1.53
Col15a1O35206 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col15a1O35206 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col15a1O35206 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Col15a1O35206 1700095J03Rik-201ENSMUST00000143715 1808 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Col15a1O35206 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col15a1O35206 Matk-204ENSMUST00000120265 1618 ntAPPRIS ALT2 TSL 5 BASIC24.63■■□□□ 1.53
Col15a1O35206 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC24.63■■□□□ 1.53
Col15a1O35206 Celf6-201ENSMUST00000034840 2765 ntAPPRIS P2 TSL 1 (best) BASIC24.63■■□□□ 1.53
Col15a1O35206 6430573P05Rik-203ENSMUST00000195547 2457 ntBASIC24.62■■□□□ 1.53
Col15a1O35206 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col15a1O35206 Josd2-205ENSMUST00000120852 727 ntAPPRIS P1 TSL 3 BASIC24.62■■□□□ 1.53
Col15a1O35206 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC24.62■■□□□ 1.53
Col15a1O35206 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col15a1O35206 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col15a1O35206 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
Col15a1O35206 Raph1-202ENSMUST00000090293 2409 ntAPPRIS ALT2 TSL 5 BASIC24.62■■□□□ 1.53
Col15a1O35206 Pdp1-204ENSMUST00000108299 2588 ntAPPRIS ALT2 TSL 2 BASIC24.61■■□□□ 1.53
Col15a1O35206 Dhx33-204ENSMUST00000124464 1835 ntTSL 5 BASIC24.61■■□□□ 1.53
Col15a1O35206 AI480526-205ENSMUST00000160255 1095 ntTSL 5 BASIC24.61■■□□□ 1.53
Col15a1O35206 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC24.61■■□□□ 1.53
Col15a1O35206 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Col15a1O35206 Avp-201ENSMUST00000046001 577 ntAPPRIS P1 TSL 1 (best) BASIC24.61■■□□□ 1.53
Col15a1O35206 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC24.61■■□□□ 1.53
Col15a1O35206 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC24.61■■□□□ 1.53
Col15a1O35206 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col15a1O35206 Mcmbp-202ENSMUST00000119081 2347 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col15a1O35206 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col15a1O35206 Gm715-201ENSMUST00000117865 831 ntBASIC24.6■■□□□ 1.53
Col15a1O35206 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC24.6■■□□□ 1.53
Col15a1O35206 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC24.6■■□□□ 1.53
Col15a1O35206 Gm6576-201ENSMUST00000169678 883 ntBASIC24.6■■□□□ 1.53
Col15a1O35206 AL672049.1-201ENSMUST00000197943 91 ntBASIC24.6■■□□□ 1.53
Col15a1O35206 Gm21596-201ENSMUST00000178049 1316 ntBASIC24.6■■□□□ 1.53
Col15a1O35206 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col15a1O35206 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC24.6■■□□□ 1.53
Col15a1O35206 Nol7-201ENSMUST00000071926 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.6■■□□□ 1.53
Col15a1O35206 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC24.59■■□□□ 1.53
Col15a1O35206 Rbfox3-206ENSMUST00000120061 2150 ntAPPRIS ALT2 TSL 5 BASIC24.59■■□□□ 1.53
Col15a1O35206 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col15a1O35206 9130221H12Rik-201ENSMUST00000169914 1465 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col15a1O35206 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col15a1O35206 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col15a1O35206 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
Col15a1O35206 Mpp6-201ENSMUST00000036225 1896 ntTSL 1 (best) BASIC24.59■■□□□ 1.53
Col15a1O35206 Krt24-201ENSMUST00000017255 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col15a1O35206 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col15a1O35206 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC24.58■■□□□ 1.53
Col15a1O35206 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC24.58■■□□□ 1.53
Col15a1O35206 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
Col15a1O35206 Gm2399-201ENSMUST00000104944 225 ntBASIC24.58■■□□□ 1.53
Col15a1O35206 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC24.58■■□□□ 1.53
Col15a1O35206 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC24.58■■□□□ 1.53
Col15a1O35206 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC24.58■■□□□ 1.53
Col15a1O35206 AC153881.1-201ENSMUST00000214448 284 ntBASIC24.58■■□□□ 1.53
Col15a1O35206 Cmc1-202ENSMUST00000215799 531 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
Col15a1O35206 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC24.58■■□□□ 1.52
Col15a1O35206 Cd37-209ENSMUST00000211373 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col15a1O35206 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col15a1O35206 Mpz-201ENSMUST00000070758 2002 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col15a1O35206 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC24.57■■□□□ 1.52
Col15a1O35206 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC24.57■■□□□ 1.52
Retrieved 100 of 76,532 protein–RNA pairs in 16.9 ms