Protein–RNA interactions for Protein: O09111

Ndufb11, NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 11, mitochondrial, mousemouse

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndufb11O09111 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufb11O09111 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC15.32■□□□□ 0.04
Ndufb11O09111 6330403K07Rik-201ENSMUST00000156068 1494 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufb11O09111 Eefsec-206ENSMUST00000205179 2208 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufb11O09111 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufb11O09111 Kcnq2-203ENSMUST00000081528 2382 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufb11O09111 Sntg2-201ENSMUST00000021004 2411 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Ndufb11O09111 1810010H24Rik-202ENSMUST00000140447 1677 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
Ndufb11O09111 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Cryzl1-203ENSMUST00000117644 1727 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Sugct-201ENSMUST00000068545 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Shisa5-201ENSMUST00000026737 1834 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Gm45640-201ENSMUST00000210665 1896 ntBASIC15.31■□□□□ 0.04
Ndufb11O09111 Hps4-201ENSMUST00000035279 2836 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 2310022A10Rik-205ENSMUST00000187960 1989 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ndufb11O09111 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
Ndufb11O09111 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ndufb11O09111 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC15.31■□□□□ 0.04
Ndufb11O09111 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC15.31■□□□□ 0.04
Ndufb11O09111 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
Ndufb11O09111 Rnf169-201ENSMUST00000080817 7147 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Ndufb11O09111 Apbb1-214ENSMUST00000189378 2878 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Myd88-201ENSMUST00000035092 1960 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Ndufb11O09111 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Ndufb11O09111 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Gm20100-201ENSMUST00000209418 2272 ntBASIC15.3■□□□□ 0.04
Ndufb11O09111 Gm45412-201ENSMUST00000210217 2275 ntBASIC15.3■□□□□ 0.04
Ndufb11O09111 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Pigv-202ENSMUST00000067902 990 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Ndufb11O09111 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Hnrnph3-202ENSMUST00000118898 2168 ntAPPRIS ALT1 TSL 5 BASIC15.29■□□□□ 0.04
Ndufb11O09111 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Ndufb11O09111 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Nags-201ENSMUST00000055409 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Atf5-202ENSMUST00000107893 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Rp9-203ENSMUST00000215715 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Pcnx-204ENSMUST00000221721 8318 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Ndufb11O09111 Ispd-207ENSMUST00000223205 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Ndufb11O09111 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Tub-201ENSMUST00000033341 5997 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Creg1-202ENSMUST00000111432 2163 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Gm27021-201ENSMUST00000181333 758 ntAPPRIS P1 TSL 4 BASIC15.28■□□□□ 0.04
Ndufb11O09111 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Acbd3-201ENSMUST00000027780 3471 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Ndufb11O09111 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC15.28■□□□□ 0.04
Ndufb11O09111 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufb11O09111 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufb11O09111 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufb11O09111 1700030C10Rik-203ENSMUST00000189625 1735 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufb11O09111 Dalrd3-201ENSMUST00000019183 1746 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufb11O09111 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufb11O09111 D130020L05Rik-203ENSMUST00000221044 803 ntTSL 2 BASIC15.27■□□□□ 0.04
Ndufb11O09111 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Ndufb11O09111 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Ndufb11O09111 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufb11O09111 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.03
Ndufb11O09111 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC15.27■□□□□ 0.03
Ndufb11O09111 Fbxo17-201ENSMUST00000032818 1958 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufb11O09111 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufb11O09111 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Ndufb11O09111 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufb11O09111 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufb11O09111 Coq10b-201ENSMUST00000027125 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufb11O09111 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufb11O09111 Fbxo22-204ENSMUST00000146201 2009 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufb11O09111 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Ndufb11O09111 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.3 ms