Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf3O08791 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf3O08791 1700008J07Rik-201ENSMUST00000185351 2432 ntBASIC19.74■□□□□ 0.75
Ebf3O08791 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf3O08791 Ercc6l2-208ENSMUST00000144763 1820 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf3O08791 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Ebf3O08791 Picalm-215ENSMUST00000209068 3511 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Ebf3O08791 Ngb-203ENSMUST00000110177 1611 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf3O08791 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
Ebf3O08791 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
Ebf3O08791 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf3O08791 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf3O08791 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
Ebf3O08791 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf3O08791 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf3O08791 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf3O08791 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC19.73■□□□□ 0.75
Ebf3O08791 Mtfmt-201ENSMUST00000074792 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf3O08791 Socs2-214ENSMUST00000172070 2153 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
Ebf3O08791 Sapcd2-203ENSMUST00000114293 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Ebf3O08791 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf3O08791 Gdf11-201ENSMUST00000026408 4062 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf3O08791 Clta-201ENSMUST00000107845 1031 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
Ebf3O08791 Sys1-202ENSMUST00000109352 2001 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
Ebf3O08791 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.72■□□□□ 0.75
Ebf3O08791 Foxk1-202ENSMUST00000198422 687 ntTSL 3 BASIC19.72■□□□□ 0.75
Ebf3O08791 Gm6365-201ENSMUST00000054711 744 ntBASIC19.72■□□□□ 0.75
Ebf3O08791 Gng5-201ENSMUST00000090031 593 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Ebf3O08791 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC19.72■□□□□ 0.75
Ebf3O08791 Cdkn3-203ENSMUST00000227149 1952 ntBASIC19.72■□□□□ 0.75
Ebf3O08791 AA386476-201ENSMUST00000098781 1665 ntBASIC19.71■□□□□ 0.75
Ebf3O08791 Spg7-211ENSMUST00000153285 2481 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
Ebf3O08791 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
Ebf3O08791 Cpeb3-202ENSMUST00000123727 2411 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Stxbp3-202ENSMUST00000106596 553 ntTSL 2 BASIC19.71■□□□□ 0.75
Ebf3O08791 Gm6420-201ENSMUST00000193885 723 ntBASIC19.71■□□□□ 0.75
Ebf3O08791 Prpf19-201ENSMUST00000025642 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Vax2-201ENSMUST00000037807 1242 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Hoxb6-202ENSMUST00000173432 1964 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ebf3O08791 D11Wsu47e-201ENSMUST00000042227 2196 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Ubl3-202ENSMUST00000164904 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
Ebf3O08791 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Mgat2-201ENSMUST00000060579 2614 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
Ebf3O08791 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
Ebf3O08791 Phf14-202ENSMUST00000115510 3353 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf3O08791 Baiap2-205ENSMUST00000106233 2442 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Ebf3O08791 Rasa1-201ENSMUST00000109552 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf3O08791 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC19.7■□□□□ 0.74
Ebf3O08791 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.7■□□□□ 0.74
Ebf3O08791 AC154266.1-201ENSMUST00000223190 503 ntBASIC19.7■□□□□ 0.74
Ebf3O08791 Cd83-201ENSMUST00000015540 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf3O08791 Pdcd2-205ENSMUST00000154293 1924 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf3O08791 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf3O08791 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Ebf3O08791 Matr3-209ENSMUST00000188275 1951 ntTSL 5 BASIC19.7■□□□□ 0.74
Ebf3O08791 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf3O08791 Lgi2-202ENSMUST00000199942 6273 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf3O08791 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf3O08791 Gm13148-201ENSMUST00000118892 745 ntBASIC19.69■□□□□ 0.74
Ebf3O08791 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf3O08791 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf3O08791 Hs3st4-201ENSMUST00000106437 3189 ntAPPRIS P1 TSL 3 BASIC19.69■□□□□ 0.74
Ebf3O08791 Laptm4a-201ENSMUST00000020909 1773 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf3O08791 Rapgef1-201ENSMUST00000091146 6212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf3O08791 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC19.69■□□□□ 0.74
Ebf3O08791 Dtnb-225ENSMUST00000174663 2381 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
Ebf3O08791 Gsto2-201ENSMUST00000056159 1351 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Ebf3O08791 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf3O08791 Fam49b-202ENSMUST00000164532 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf3O08791 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC19.68■□□□□ 0.74
Ebf3O08791 Pde1b-201ENSMUST00000023132 3218 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf3O08791 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC19.68■□□□□ 0.74
Ebf3O08791 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf3O08791 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC19.68■□□□□ 0.74
Ebf3O08791 Foxi3-202ENSMUST00000163089 1278 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ebf3O08791 Foxi3-201ENSMUST00000069634 1206 ntAPPRIS P2 TSL 5 BASIC19.68■□□□□ 0.74
Ebf3O08791 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Ebf3O08791 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
Ebf3O08791 Nipsnap2-201ENSMUST00000086046 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf3O08791 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf3O08791 AC152827.1-201ENSMUST00000221143 2189 ntBASIC19.67■□□□□ 0.74
Ebf3O08791 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC19.67■□□□□ 0.74
Ebf3O08791 Gm5408-201ENSMUST00000197998 747 ntBASIC19.67■□□□□ 0.74
Ebf3O08791 Ube2h-202ENSMUST00000102993 4657 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf3O08791 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf3O08791 Krt5-201ENSMUST00000023709 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Ebf3O08791 Fam49b-207ENSMUST00000228226 1896 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
Ebf3O08791 Rab5c-201ENSMUST00000019317 1967 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Rnpep-201ENSMUST00000074357 2171 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Ksr1-202ENSMUST00000108264 2748 ntTSL 5 BASIC19.66■□□□□ 0.74
Ebf3O08791 Noa1-201ENSMUST00000047860 2288 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Ebf3O08791 Gm7290-201ENSMUST00000104990 617 ntBASIC19.66■□□□□ 0.74
Ebf3O08791 Gm12918-201ENSMUST00000120234 636 ntBASIC19.66■□□□□ 0.74
Ebf3O08791 Gm15710-201ENSMUST00000121821 636 ntBASIC19.66■□□□□ 0.74
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms