Protein–RNA interactions for Protein: O08759

Ube3a, Ubiquitin-protein ligase E3A, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3aO08759 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC20.55■□□□□ 0.88
Ube3aO08759 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC20.55■□□□□ 0.88
Ube3aO08759 Klhl2-201ENSMUST00000034017 3412 ntAPPRIS P2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ube3aO08759 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Gm9885-202ENSMUST00000186234 2209 ntBASIC20.54■□□□□ 0.88
Ube3aO08759 Gm32699-201ENSMUST00000221728 1988 ntBASIC20.54■□□□□ 0.88
Ube3aO08759 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC20.54■□□□□ 0.88
Ube3aO08759 Nat14-201ENSMUST00000047309 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Gm43759-201ENSMUST00000196925 1261 ntBASIC20.54■□□□□ 0.88
Ube3aO08759 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Galnt14-202ENSMUST00000112591 1843 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Paics-201ENSMUST00000031160 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Plppr3-201ENSMUST00000092325 2766 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ube3aO08759 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.53■□□□□ 0.88
Ube3aO08759 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
Ube3aO08759 Fam129b-201ENSMUST00000028135 3714 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3aO08759 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3aO08759 Maneal-201ENSMUST00000064444 2727 ntAPPRIS P1 TSL 3 BASIC20.53■□□□□ 0.88
Ube3aO08759 Pqlc1-201ENSMUST00000070135 1911 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ube3aO08759 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ube3aO08759 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ube3aO08759 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC20.52■□□□□ 0.88
Ube3aO08759 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ube3aO08759 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
Ube3aO08759 Gm4737-201ENSMUST00000059524 2093 ntAPPRIS P1 BASIC20.52■□□□□ 0.87
Ube3aO08759 Fxr2-201ENSMUST00000018909 2951 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ube3aO08759 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Ube3aO08759 Crhr1-201ENSMUST00000093925 2460 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3aO08759 Cdkl3-207ENSMUST00000109080 2749 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3aO08759 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3aO08759 Gm22238-201ENSMUST00000175222 88 ntBASIC20.51■□□□□ 0.87
Ube3aO08759 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3aO08759 Phf23-204ENSMUST00000133485 1607 ntTSL 5 BASIC20.51■□□□□ 0.87
Ube3aO08759 Wdr37-203ENSMUST00000164183 1780 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3aO08759 Plekhg3-207ENSMUST00000219063 4535 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
Ube3aO08759 Prmt3-201ENSMUST00000032715 2507 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ube3aO08759 Fam105a-203ENSMUST00000226170 3043 ntBASIC20.51■□□□□ 0.87
Ube3aO08759 Fbxo24-202ENSMUST00000111002 2306 ntTSL 5 BASIC20.5■□□□□ 0.87
Ube3aO08759 Gm46212-201ENSMUST00000220256 1003 ntTSL 5 BASIC20.5■□□□□ 0.87
Ube3aO08759 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ube3aO08759 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3aO08759 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3aO08759 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3aO08759 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ube3aO08759 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC20.49■□□□□ 0.87
Ube3aO08759 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ube3aO08759 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3aO08759 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ube3aO08759 Pgam5-202ENSMUST00000112505 2098 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3aO08759 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
Ube3aO08759 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3aO08759 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3aO08759 Marcks-201ENSMUST00000092584 4048 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3aO08759 Sox12-201ENSMUST00000063332 4169 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
Ube3aO08759 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3aO08759 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ube3aO08759 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Slc16a10-202ENSMUST00000213488 2325 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Ccdc3-201ENSMUST00000027988 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Tcte2-209ENSMUST00000143162 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Lrrc75b-201ENSMUST00000051129 4601 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Fbxw2-206ENSMUST00000113080 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Nudt10-201ENSMUST00000103006 1775 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Fzr1-205ENSMUST00000140901 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Tmem222-201ENSMUST00000105907 1484 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Pno1-201ENSMUST00000020317 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ube3aO08759 Asap2-202ENSMUST00000064595 5678 ntAPPRIS P4 TSL 5 BASIC20.47■□□□□ 0.87
Ube3aO08759 Gm42911-201ENSMUST00000199360 1630 ntBASIC20.47■□□□□ 0.87
Ube3aO08759 Svbp-201ENSMUST00000030395 733 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3aO08759 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3aO08759 Zc3h14-202ENSMUST00000057000 3046 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3aO08759 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3aO08759 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3aO08759 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3aO08759 Nfatc2-201ENSMUST00000029057 2310 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3aO08759 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Ube3aO08759 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC20.46■□□□□ 0.87
Ube3aO08759 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Ube3aO08759 Kat14-201ENSMUST00000028911 3801 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Olig2-201ENSMUST00000035608 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Gm35558-201ENSMUST00000222675 2219 ntBASIC20.46■□□□□ 0.87
Ube3aO08759 Sphk1-203ENSMUST00000100201 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Jag1-201ENSMUST00000028735 5612 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Dnpep-204ENSMUST00000185797 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC20.46■□□□□ 0.87
Ube3aO08759 Zfp335os-201ENSMUST00000129364 1127 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Zfp580-202ENSMUST00000208570 693 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC20.46■□□□□ 0.87
Ube3aO08759 Prdm8-201ENSMUST00000112959 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Zmynd10-201ENSMUST00000010188 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Coq9-201ENSMUST00000034234 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ube3aO08759 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 12.6 ms