Protein–RNA interactions for Protein: O08738

Casp6, Caspase-6, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casp6O08738 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casp6O08738 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casp6O08738 Tuba3a-201ENSMUST00000088246 1509 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Casp6O08738 Kcnq5-203ENSMUST00000115300 6975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.22
Casp6O08738 Meg3-207ENSMUST00000143836 1896 ntTSL 1 (best) BASIC16.39■□□□□ 0.22
Casp6O08738 Slc35b3-209ENSMUST00000225432 2216 ntAPPRIS P3 BASIC16.39■□□□□ 0.22
Casp6O08738 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casp6O08738 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casp6O08738 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Casp6O08738 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casp6O08738 Galr2-201ENSMUST00000055872 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casp6O08738 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Casp6O08738 Gm21992-201ENSMUST00000172000 1434 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
Casp6O08738 Gm21992-206ENSMUST00000179909 1435 ntTSL 5 BASIC16.39■□□□□ 0.21
Casp6O08738 Gm38399-201ENSMUST00000112103 1645 ntTSL 2 BASIC16.39■□□□□ 0.21
Casp6O08738 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC16.39■□□□□ 0.21
Casp6O08738 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC16.39■□□□□ 0.21
Casp6O08738 Hoxc12-201ENSMUST00000055562 1031 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casp6O08738 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casp6O08738 Mall-201ENSMUST00000028856 2006 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casp6O08738 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Casp6O08738 Pick1-204ENSMUST00000163571 2054 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Casp6O08738 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC16.39■□□□□ 0.21
Casp6O08738 Tinagl1-202ENSMUST00000105998 1976 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 Spsb3-204ENSMUST00000119829 1955 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
Casp6O08738 Rab7-205ENSMUST00000113600 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 Gm12527-201ENSMUST00000117967 564 ntBASIC16.38■□□□□ 0.21
Casp6O08738 Gm20049-201ENSMUST00000219950 730 ntBASIC16.38■□□□□ 0.21
Casp6O08738 Uqcc2-201ENSMUST00000025045 500 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 Pdpk1-205ENSMUST00000115411 1724 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 Phf12-202ENSMUST00000108360 3047 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 Zfp710-204ENSMUST00000206039 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Casp6O08738 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
Casp6O08738 Mtmr1-202ENSMUST00000114601 4640 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
Casp6O08738 Plk5-202ENSMUST00000105351 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Gpr160-202ENSMUST00000108258 2139 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Plk5-201ENSMUST00000039836 2112 ntAPPRIS P3 TSL 2 BASIC16.37■□□□□ 0.21
Casp6O08738 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Dda1-202ENSMUST00000124745 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Slc35a2-203ENSMUST00000115663 1527 ntAPPRIS P4 TSL 2 BASIC16.37■□□□□ 0.21
Casp6O08738 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC16.37■□□□□ 0.21
Casp6O08738 Mgll-203ENSMUST00000113582 1034 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Gm7860-201ENSMUST00000121190 879 ntBASIC16.37■□□□□ 0.21
Casp6O08738 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC16.37■□□□□ 0.21
Casp6O08738 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Slc3a2-201ENSMUST00000010239 1819 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Foxf2-201ENSMUST00000042054 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Acvrl1-202ENSMUST00000117984 1852 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
Casp6O08738 Gm43909-201ENSMUST00000203443 1876 ntBASIC16.37■□□□□ 0.21
Casp6O08738 Gm20634-201ENSMUST00000090779 2956 ntBASIC16.37■□□□□ 0.21
Casp6O08738 Ahcyl2-202ENSMUST00000102995 5155 ntAPPRIS ALT1 TSL 5 BASIC16.37■□□□□ 0.21
Casp6O08738 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.37■□□□□ 0.21
Casp6O08738 Prss32-201ENSMUST00000061725 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Casp6O08738 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Casp6O08738 Rimklb-201ENSMUST00000068242 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Casp6O08738 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC16.36■□□□□ 0.21
Casp6O08738 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC16.36■□□□□ 0.21
Casp6O08738 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Casp6O08738 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.36■□□□□ 0.21
Casp6O08738 Nudt14-201ENSMUST00000002881 734 ntTSL 2 BASIC16.36■□□□□ 0.21
Casp6O08738 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Casp6O08738 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Casp6O08738 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
Casp6O08738 Mink1-201ENSMUST00000072237 4994 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
Casp6O08738 Baiap2-201ENSMUST00000026436 2394 ntAPPRIS P4 TSL 1 (best) BASIC16.36■□□□□ 0.21
Casp6O08738 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Casp6O08738 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Casp6O08738 Tead2-201ENSMUST00000033060 2140 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Casp6O08738 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
Casp6O08738 Cep78-201ENSMUST00000047704 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
Casp6O08738 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Casp6O08738 Gm32051-202ENSMUST00000197905 2385 ntBASIC16.35■□□□□ 0.21
Casp6O08738 Ppm1n-201ENSMUST00000032560 1648 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Casp6O08738 Smyd2-201ENSMUST00000027897 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Casp6O08738 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.35■□□□□ 0.21
Casp6O08738 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Casp6O08738 Speg-204ENSMUST00000113589 833 ntTSL 2 BASIC16.35■□□□□ 0.21
Casp6O08738 Rps2-ps11-201ENSMUST00000195283 868 ntBASIC16.35■□□□□ 0.21
Casp6O08738 Trmt13-210ENSMUST00000198454 880 ntBASIC16.35■□□□□ 0.21
Casp6O08738 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Casp6O08738 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC16.35■□□□□ 0.21
Casp6O08738 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC16.35■□□□□ 0.21
Casp6O08738 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Casp6O08738 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
Casp6O08738 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Casp6O08738 Cnrip1-201ENSMUST00000058159 1654 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Casp6O08738 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Casp6O08738 Spint1-201ENSMUST00000028783 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Casp6O08738 Dbf4-201ENSMUST00000002368 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Casp6O08738 Thap11-201ENSMUST00000040445 1819 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
Casp6O08738 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 31.6 ms